Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00853 ACAAACCAGAACAATATAAGTTACTATTTGTTTTGTTTTTGAGACAATTTATGAGTGGATAAAGATGAAGAAGACACTGGCAATCAACAGCAGTGAGTCCTCTAAACTTGATCGCAAAACCATTGAAAGGAACCGCAGAGTTCACATGAAATCCCTCTGCCATCAGCTTTCTTCTCTTGTTCCTCCCAACCTCAAACCATCCAAATCCAAGCTGATGCTAGGGCAGCAGGACCAGCTGGATCTTGCAGCAAGGTATATAAAACACATGACAGAGAGAATAGAGAAACTGAAGAGGCAGAAGGAGCAAGCCATGTCATCAAACCAAAGCAATGATTATAGGAAAATGTTGAACAAAAATGTAAACACCAAATTGCCAATATTTGAGCTAAGAGACTTGGGTTCCTGCATTCAAGTGATGTTGGTGAGTGGTTTAAACAAGACATTCATGTTGTACGAAGTGATTAGTGTTCTTGAAGAAGAAGGTGCTGAAGTTGTCAATGCAAGCTTCTCAACTATAGGCGACAAGACATTTTATGTTGTTCATGCTCAGGTTAAAATATCAAGAGTGGGAGTAGAGACCACAAGGGTATGTGAAAGACTTCAAGAGTTAATTACCCCTCTTGAAATCTGGCCGGAAGACGGGTGAATAATTAATGTCTGAGAGCTACCTGCTGTCACTAGCTAGCTATACATGTATTGTGGCCTGGCCACAAATTATTAGTTTAAAAGCTAAATATGATCTGTGTACCAACACAACAAAAGAGA 765 0.3974 MKKTLAINSSESSKLDRKTIERNRRVHMKSLCHQLSSLVPPNLKPSKSKLMLGQQDQLDLAARYIKHMTERIEKLKRQKEQAMSSNQSNDYRKMLNKNVNTKLPIFELRDLGSCIQVMLVSGLNKTFMLYEVISVLEEEGAEVVNASFSTIGDKTFYVVHAQVKISRVGVETTRVCERLQELITPLEIWPEDG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00853 193 Coils Coil 58 85 - -
Pste2g00853 193 FunFam Transcription factor bHLH162 5 95 - -
Pste2g00853 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
Pste2g00853 193 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 183 - -
Pste2g00853 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 87 IPR036638 GO:0046983
Pste2g00853 193 Gene3D - 4 86 IPR036638 GO:0046983
Pste2g00853 193 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00853 Pste-Chr2 9130610 9132033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00853 8 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 35.135 4.91e-26 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste2g00853 HLH 2.1e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02248 6 10751319 10752365 Pste2g00853 2 9130610 9132033 ECH
Pste2g00853 2 9130610 9132033 Pste2g00853 2 9130610 9132033 ECH
Pste6g02248 6 10751319 10752365 Pste2g00853 2 9130610 9132033 PCT