Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00799 CACACATGCCATGCTATGCTACAATACAATTCCCACTTCACATTATTCCTCTTCCTTCTCTTCTTCATCACTTGTGTGCAATGCTTTAATTTTCACAATCAACTGCAAGTAGCAGTGCCATTTTAGTTTGTGTACACTTCTGGATCAGAAGCCAAGGTCTCGCGGCTTCACTGTTATTATCCCAAAATCACCACTGAATGGGTTTATCTTCTTTGCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCCTCTGGGGACATGCTTACATGTTCAAGGCCCATGATAGAGAGGAGGCTAAGACCCCCACATGACCAAGCTCTAAAGTGTCCCAGGTGTGACTCAACCCACACCAAGTTCTGCTACTACAACAATTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGTTGCAGAAAGAACAAAAAAGTCTCTGCAAAAAAATCCAACGATCACCAATTAGTTAACAACCAAATTAGCCAAACACAGCCCCCACCCTCCTCCTACCATCACAACCCCAAAGACCTTCAACTTTCCTTCCCAGATGTGCAGTTTTCCCACCTCAGCAACTTGCTTGGGACTAATGCAGGAGCACTGGGAAACCCTAGTTTCATGGAGGGGAAATATGGCATTGGCATGATTGAGAACCCTAGGCCAATTGACTTCATGATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAATAGTGACATGGGTATGGGTAGTACTGTTGGCCTGGGAGATATGAATGGTACTCAAAATGGATTGCCACCAAATTTTCATGGTCTTTCAGCATTTAGTGGCATGTCTATGTCCCTTGATGGCAACAACAGTAGCAATGGTGCTCATAACTACTTAATGGACTCTTGCCAGCGTTTGATGCTGCCATATGATGCCAATGAAGACCATAATGCCTCAATTGATGTGAAGCCAAACCCTAAACAACTATTGTCCCTTGAATGGCAAGACCAGGGTTGCTCTGACGCAGGAAAAGACTCATTTGGGTATCTCAACGGTCCAGGATCTTGGACTGGCATGATGAATGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAAAAGGCAATTCTAATCTCAAGTCACAACTCAATGATGATGATGCATGGATATATGATCTACGGCTAATCTCTCTCTTGGCTTGATTAATCAACTATCATCATCATTTTCAATTCCCTAAGTATATTTTATTTTATGTGCTATTATATACATAAAGCCTTTTTAAATGGGAGGGTTCCTCGTATTTTCATGTGTAGTGTTTCTTTCTAGCTATCTAAAAAATATATATATCTTAGGGTGGTTTTATTCAGGTTTCTATTGACTTAACCAAAGAGAGTGTGAATGAGAAGCTTCAGAGTCCAATTCGACTGCTTTGGTGCGTTACCTTTTGGTTTTCATATTATATATATTTGTGTCATTGTGTGCGACACGTCATGGAAGCTTTAGGATTTATGCTGTAACATCGAGG 1617 0.4218 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHQLVNNQISQTQPPPSSYHHNPKDLQLSFPDVQFSHLSNLLGTNAGALGNPSFMEGKYGIGMIENPRPIDFMMESKLEGIIGSSSSRNFDFFGNSDMGMGSTVGLGDMNGTQNGLPPNFHGLSAFSGMSMSLDGNNSSNGAHNYLMDSCQRLMLPYDANEDHNASIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSSTTNPLV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00799 337 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Pste2g00799 337 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Pste2g00799 337 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Pste2g00799 337 MobiDBLite consensus disorder prediction 108 139 - -
Pste2g00799 337 MobiDBLite consensus disorder prediction 118 139 - -
Pste2g00799 337 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 213 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00799 Pste-Chr2 8486133 8488212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00799 1 337 C2C2-Dof Transcription Factor Family AT5G62940 42.857 3.70e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste2g00799 zf-Dof 1.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02210 6 10473377 10475362 Pste2g00799 2 8486133 8488212 PCT