Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00787 CTCAACCTCAATTCTCAATTTATGGATTCTTGTGTATCATTTCTGCTCTAAAATCACTCTTTTTTAATTTTGCTCCCTCCCGTGCTACGTACTGCATCTATCTCGCACTTCAGGGGATTTGTTATAATAGGATCGCTACTCATTTCCCCATCGGAAGTGGTACAAAGGGATGCCCAGCTGATTCCATTGTGAAGAGACAAGAAAGAAATCAAACTTATAATGTATCCCAACCAAGCCTTTTCTTCAGGGTCCTATGCAGAGATGATAGCCGGGACTTCTCTGTTGCCTCATGACTACAGTGAATCTGTGGGAGGACAAAACGAGGTTAAGTTTATTACTGCTATGGGTGACACAGTGACCATGCAATCTATTAACGGGCATTCCAATGCTGCAACTGATGATCCAGCATGCAACTCTTATGTTGGCGATTCCCATGTTGTTTCAAGGACACAAATGGGAATGGTAGATAATGAGCAAAACATAAATTGCCAGGGCTTATCTCTCAGTCTCGGAACACTCATGCCTTCTAATGCTTCTGTCTCTCCATTTCAATACCAGTATCACGACACTGGTCTCTTACCACTAATGAATGATTTTCCAAATCTAAAGGGAACCATGTCTCTCAAAGATGATGAGACTAATGACCTACATAGAGAGTTGAGAAGTGCTGAATGCATGGCAGCTGTGTCTTCTGGAGGCTTTCATGACATGGTAAAAAAGGAGGGTTTTTATAGCCCCCACCCCTCCATGTGTCTTAAAGAAGTCCCCTCTGATCTACCAGGTTACTCAAACAGTATTTTAAACTCCCAATACCTTAAGGCGGCACAGGAGCTGCTTGATGAAATAGTAAGTGTCCGAAAGGCTTTGAAGCAACCTGGAATGGAGAAACAAGAAAATGACCGTGACATTGGATTAGAGGGCTCTAAAGATTCTGATGGAAAATCTACTAGTCAATCTATGCAAATGTCTTCAGGCCCTAATGGTTCCACTGCCAATGCTTCTAGTGAACTATCATCTGCAGAACGGCAGCACTTGTTGGACAAGAAAACAAAACTTTTGTCCATGTTGGATGAGGTAGATAAAAGATACAGACAGTACTGCCATCAGATGCAGATGGTGGTGTCATCTTTTGACATGGTTGCTGGATGTGGAGCAGCAGAACCATATACCACACTAGCTTTAAGAACAATTTCTCGCCACTTTCGGTGTTTGCGTGATGCCATTAGTGGCCAAATTCAAGTGACACAAAGGAGCCTTGGGGAGCAAGAGGGAATACCCCGTCTCCGCTATGTGGATCAGCAGCTTAGACAACAAAAGGCTCTTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGCCTTCCTGAAAGTTCTGTTTCAATTCTCCGTGCTTGGCTCTTTGAACATTTTCTTCATCCTTACCCCAAGGATTCGGAGAAAATTATGCTGGCTAGGCAAACAGGCTTGACCAGAAATCAGGTGGCAAATTGGTTCATTAATGCACGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAGGAGTTTGGAGACTCTGAGATGAACTGCAACCTTTCATCTGAGAACACGGTCAAAGGTAAAAGAAATGATGTCCAAGAGTCTGGTAATAATAATAATAATAATAATACTAATAATAAATGGGAAGAGTCACAGGACAATTTAGTAATAGTTGATAGTGTCCAAGAAGTCCAACCTCAAGCAGAACTGGATAGAGGGGTGCATGTAGAAAATGTGGTGATGGATTCTGGAACTGGGAAATTGCAGGGTGACCAAAACCAAAGGCATTGCATGAACAGCAGCAGCAGCAGCAACCTTTATTCTATCTCAACCAACCAGAATGGTGGGGATGGAAGCCTAATGGGTTCTACTCATGCCACATATGATTTATCAGAGTTGGGTAACTTTACTGTGGGAGGCCACGTCTCGCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGGATTTGCCATGTCTGATGATGCCATCCACAAAAGACGTAATCAAACATTGGCCTCTTCCCCGGAGACTGATTTGCTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATTTGCTGCATGAGTTTGTCATCACAACAATACAATACAATGAACAGAACAGTTTAACCTATGGAGGGCTCCCCCCCTGTGGTGAGAGGGAAAGAAAGAGATTTACACTGTTTGGAGCTGCTTTTGAGTCTCCCAAAAAAAAATATACAACTGCAGGGACTAAAGCTGGAAGATTGATGCTTTTGCTTAATTCAGAATGTTATGGGGCTCTCTTACACTGTAGTGGGTCACAACCACCACACGCCTCAATTTCCCAATACCTTGTGCTCTTCACTTTGTTAACATACACATACACTAGCAAAACAAAAACTCTTCCCGTTATGTCCAATTCCATCACTCAGCAAAACCAATTTGACAACCAAGACCTTGATGCTTATGGCTCTTCTATCAGACACAACAATGCATTTCCCGAGGCCTTGGGAGCATTTCCTACCATTGGAGTAGCCCAGGGGTCTGAGATAAGCCACACAAGGCATTTCATGGATCTTCTTGGAGCACCTAATGAGAGCAACCACCACCAAGCTCAGGGGCTCTCTCTTTCTTTAGGCTCTCACATGCTTCTTCCCTCCCATCATCACAGACCCTTAAACCCCTCTCTCATGAACCCCAATTACTTCATCTCTGGACAAGACCTACGTGACCCTTGTAATCCACCCCTCGACCATCATCATCTCACCAGTGACTACTTTTTCAACACTTTTGCTTCTTCTTCTGCCCCTCCCAACCGTTCTCCTAATTCCACCTCTTATGCTGCCGAGTCTTTTTCTGCTCTCATTGGCAACTCCAGGTACCTCAGACCGGTTCAGTCCCTTCTTGAAGATCTTGTTGACGTTGGTGCAAATGTCGTCGATAGAATCAATGCAAAGTATGTTGACAAGTTGTTTCGTGGGAGTCGAGAACCTGCTAGGACACTTTCCTCTGAGTTGAAGGCAGAGTTGAGGAATAATGGACCTTTATTGCCTGACAAACATGAACATCATATCAAAATTGCAAGGTTGATTTCTTTGTTGGATGAGGTTGAGGGCAGGTGTGAAAAATACTACCATCAAATGGAAGAAGTGGTGTCATCCTTTGAAATGATAGCAGGTTTGGGAGCTGCCAAGTGTTACACTGCTTTGGCACTCCAAGCCATGTCGAGGCATTTCTGCAGCTTGAGAGATGCCATATTGTCACAAATAAATGCTGAGAAAAGAAAACTCTTTCAGGATTTACCTAAGATCAGCAGTGGTTTGTCTCAACTAAGCCTGTTTGATAGAGACAGTAGACAGAGTAGAATGTCTCTCCAACAACTTGGGGTGATCCAAAGCCAACGCCAAGTTTGGAGACCCATCAGAGGGTTGCCTGAAACCTCTGTGGCAATTCTTCGTTCTTGGCTCTTTGAGCACTTTCTCCATCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCCCAGACAGGTTTAACTAAAAACCAAGTATCAAATTGGTTCATAAATGCTCGAGTACGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAGGAGTTTGGGGAGTCCTCTGAAGACTCCAACCCTGCTGGCAACAACTACTTGACAAGGGAAGATACCACAGACTGTGTAGAGGATTGAATTTGAATCAAAATTCAAAGCCCCGCTGAACAATATTATTGTTTGACAAAAATGGGCCTTAAAATGGTTGCCCATCTCTCCAAAATCAAGAGATAAACATTATGTAACATGACAAGATGATGAGCCACAATATGTTCAGGTGAAGTTCCAGATTTTGAAAATCATGACTAATGTTCCTTAGGTTAAGTCACCAGCTTGTAACATATCGTGAGGCTTGTTGCGTCAGCTTTGCAATTGATACCAGTTTATAGGGAAACAAAAATTGAAGCAGTGGATGAGATCATGAGAAAATCGTATTATCACAAATTCACAATTTGTTTCACAGCCCTGTCCAGTAACAATTGCCTTGAGCATGTCATTTGTTATCTTGTAATAAATGAGATAGCGAATTTCATG 4134 0.4299 MYPNQAFSSGSYAEMIAGTSLLPHDYSESVGGQNEVKFITAMGDTVTMQSINGHSNAATDDPACNSYVGDSHVVSRTQMGMVDNEQNINCQGLSLSLGTLMPSNASVSPFQYQYHDTGLLPLMNDFPNLKGTMSLKDDETNDLHRELRSAECMAAVSSGGFHDMVKKEGFYSPHPSMCLKEVPSDLPGYSNSILNSQYLKAAQELLDEIVSVRKALKQPGMEKQENDRDIGLEGSKDSDGKSTSQSMQMSSGPNGSTANASSELSSAERQHLLDKKTKLLSMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMNCNLSSENTVKGKRNDVQESGNNNNNNNTNNKWEESQDNLVIVDSVQEVQPQAELDRGVHVENVVMDSGTGKLQGDQNQRHCMNSSSSSNLYSISTNQNGGDGSLMGSTHATYDLSELGNFTVGGHVSLALELRNCESDGFAMSDDAIHKRRNQTLASSPETDLLDYHFTDSGKQQHRFGNPHLLHEFVITTIQYNEQNSLTYGGLPPCGERERKRFTLFGAAFESPKKKYTTAGTKAGRLMLLLNSECYGALLHCSGSQPPHASISQYLVLFTLLTYTYTSKTKTLPVMSNSITQQNQFDNQDLDAYGSSIRHNNAFPEALGAFPTIGVAQGSEISHTRHFMDLLGAPNESNHHQAQGLSLSLGSHMLLPSHHHRPLNPSLMNPNYFISGQDLRDPCNPPLDHHHLTSDYFFNTFASSSAPPNRSPNSTSYAAESFSALIGNSRYLRPVQSLLEDLVDVGANVVDRINAKYVDKLFRGSREPARTLSSELKAELRNNGPLLPDKHEHHIKIARLISLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLFDRDSRQSRMSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPAGNNYLTREDTTDCVED 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00787 1172 CDD homeodomain 378 439 IPR001356 GO:0003677
Pste2g00787 1172 SUPERFAMILY Homeodomain-like 379 445 IPR009057 -
Pste2g00787 1172 ProSiteProfiles 'Homeobox' domain profile. 1095 1136 IPR001356 GO:0003677
Pste2g00787 1172 MobiDBLite consensus disorder prediction 465 485 - -
Pste2g00787 1172 Gene3D - 375 452 - -
Pste2g00787 1172 Gene3D - 1071 1151 - -
Pste2g00787 1172 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 127 473 - -
Pste2g00787 1172 Pfam Associated with HOX 193 336 IPR006563 -
Pste2g00787 1172 Pfam Associated with HOX 894 1024 IPR006563 -
Pste2g00787 1172 MobiDBLite consensus disorder prediction 1145 1172 - -
Pste2g00787 1172 MobiDBLite consensus disorder prediction 217 268 - -
Pste2g00787 1172 CDD homeodomain 1076 1137 IPR001356 GO:0003677
Pste2g00787 1172 SUPERFAMILY Homeodomain-like 1082 1143 IPR009057 -
Pste2g00787 1172 Pfam Homeobox KN domain 1093 1132 IPR008422 GO:0003677|GO:0006355
Pste2g00787 1172 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Pste2g00787 1172 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
Pste2g00787 1172 SMART prehox3 187 337 IPR006563 -
Pste2g00787 1172 SMART prehox3 888 1026 IPR006563 -
Pste2g00787 1172 MobiDBLite consensus disorder prediction 218 236 - -
Pste2g00787 1172 SMART HOX_1 1076 1140 IPR001356 GO:0003677
Pste2g00787 1172 SMART HOX_1 378 442 IPR001356 GO:0003677
Pste2g00787 1172 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00787 Pste-Chr2 8378291 8389110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00787 186 642 Homeobox Transcription Factor Family AT2G16400 46.154 6.43e-112 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste2g00787 POX 3.6e-51 No_clan