Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00775 TTGCTGATTCAACTGGTGGAACAATATGGATTGAGGAAGTGGTCTCATATTGCTAAGATATTGCCTGGAAGAATTGGAAAACAATGCAGAGAGAGATGGCATAACCATCTAAGACCTGACATTAAGGACACATGGAACGAAGAAGAGGATAAGATACTAATCGAAGGTCATGCTGTGATAGGAAATAAATGGGCAGAGATTGCTAAAAGGCTGCCAGGAAGAACTGAGAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAAAGTGTCGCTCAAAGTACCCTAGAGGCACTCTTCTGCAAGACTATATCAAGAGCTTGAACTTAGACAAGAACCCTTCAAGAGATTATAGGAGAAAATATTCTGCTAATAATGCTAATGCAGTGAATAACAAAACCATCACTAGCAAAGTCACTGCACCAGCTTTGCCCCAGTCAGCATATCAATTTTGTGCCACTGATTGCTTGGCACCAAACTATGATTTTAATGTGGTCCCAGATTTTTGCTTTGGTGATAATGTTTTTGAGCAAGGGTGTAGCGTTGATTCTCTTCTAGATGATGTGCATTGTGTTCCTCTTATGGATAAGAAAAACTTTGAAGGAAAAATGCAATGTGATCCTATTATGGAGAGACAAAATTTGGATCTGGGAGGAATAATAATGGAGTGTGGTTCTGTTATTGATATTGATGAGGATCATGTTGAGACAGAGATGCCACTAGAGGTGTCTGAGGCTGAAGTTAAGAAGGAGTTGGATTTGGTTGAGATGATGTCTCGGATTAACAATGAAATGGTTCATGTTTGA 822 0.3917 LLIQLVEQYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKDTWNEEEDKILIEGHAVIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTLLQDYIKSLNLDKNPSRDYRRKYSANNANAVNNKTITSKVTAPALPQSAYQFCATDCLAPNYDFNVVPDFCFGDNVFEQGCSVDSLLDDVHCVPLMDKKNFEGKMQCDPIMERQNLDLGGIIMECGSVIDIDEDHVETEMPLEVSEAEVKKELDLVEMMSRINNEMVHV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00775 273 Gene3D - 1 42 - -
Pste2g00775 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 91 IPR017930 -
Pste2g00775 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Pste2g00775 273 Gene3D - 43 105 - -
Pste2g00775 273 CDD SANT 1 37 IPR001005 -
Pste2g00775 273 CDD SANT 44 87 IPR001005 -
Pste2g00775 273 Pfam Myb-like DNA-binding domain 43 84 IPR001005 -
Pste2g00775 273 Pfam Myb-like DNA-binding domain 1 37 IPR001005 -
Pste2g00775 273 SUPERFAMILY Homeodomain-like 17 95 IPR009057 -
Pste2g00775 273 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Pste2g00775 273 FunFam Transcription factor MYB119 43 107 - -
Pste2g00775 273 PANTHER MYB PROTEIN-RELATED 1 133 - -
Pste2g00775 273 ProSiteProfiles Myb-like domain profile. 42 87 IPR001005 -
Pste2g00775 273 SMART sant 1 39 IPR001005 -
Pste2g00775 273 SMART sant 41 89 IPR001005 -
Pste2g00775 273 FunFam Transcriptional activator Myb isoform A 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00775 Pste-Chr2 8221670 8222895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00775 1 194 MYB Transcription Factor Family AT4G18770 62.000 8.19e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g00775 Myb_DNA-binding 1.7e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00775 2 8221670 8222895 Pste6g02172 6 10290646 10292911 PCT