Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00753 AAATGGAGAACAGCCTCTACAACTTTTACTGTTCAACCACTTACTCAGACCAGTCAACAATGGCTCCACCTCCGCCGTCTAAGTCTGTCTTTGAGAAGAAGGAGGAGAATCTTTCAAAAGTACTTCGTGCTAAAGTTGCTTCTCATCCTCTATTCCCTCATCTCCTCCATGCTTATATCGATTGCCACAAGGTAGGAGCCCCGCAAAATGTGGCAAACCTATTGGAAGAAATCAAAGGAGAGAACACTGGGGTGTGTCAGATATCTGAATCTGAAGGTTTCTTGGATGCTGATCCCGAGCTCGATGATTTCATGGGAACGTTTTGTGATTTATTGTTGAAGTACAAATCTGATCTTTCAAGGCCTTTTGACGAGGCAACCATGTTCCTGAGCCACATGGAAACACAGCTTCACTCTATCTGCAACCTTGCTTCTACAAACAGCACTCCTCATCAACCTGATGAAGTTACTGGATCATCTGAGAAAGATCTTATTAGTAAGGAGGAGAAAGAGGCAATTGAGTGCAAGAAGATAAATGAAGTTCAAGAGCTGAAGGATAATCTTCTAGGTAGATATAGCGGTTACATTACCAATCTGAAGCACGAATTTTCCAGAAAGAAGAAGAAAGAAAAACTACCAAAAGAAGCAAAGCAAATCTTACTTGCATGGTGGAATATTCACTTCAAGAAGCGCCATTGGAAACCAACGGAGGAAATGCAAGCAGCAATTTTGGATGGTCTCTATGGACCCCTCATCAAT 758 0.4208 MENSLYNFYCSTTYSDQSTMAPPPPSKSVFEKKEENLSKVLRAKVASHPLFPHLLHAYIDCHKVGAPQNVANLLEEIKGENTGVCQISESEGFLDADPELDDFMGTFCDLLLKYKSDLSRPFDEATMFLSHMETQLHSICNLASTNSTPHQPDEVTGSSEKDLISKEEKEAIECKKINEVQELKDNLLGRYSGYITNLKHEFSRKKKKEKLPKEAKQILLAWWNIHFKKRHWKPTEEMQAAILDGLYGPLIN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00753 252 ProSiteProfiles ELK domain profile. 182 202 IPR005539 GO:0003677
Pste2g00753 252 SMART KNOX2_2 90 141 IPR005541 GO:0003677|GO:0005634
Pste2g00753 252 Pfam KNOX1 domain 41 81 IPR005540 GO:0003677|GO:0005634
Pste2g00753 252 SMART KNOX1_2 39 83 IPR005540 GO:0003677|GO:0005634
Pste2g00753 252 SMART ELK_2 182 203 IPR005539 GO:0003677
Pste2g00753 252 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 30 145 - -
Pste2g00753 252 Pfam KNOX2 domain 96 140 IPR005541 GO:0003677|GO:0005634
Pste2g00753 252 Pfam ELK domain 182 203 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00753 Pste-Chr2 7907880 7915544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00753 3 252 Homeobox Transcription Factor Family AT1G23380 38.732 1.53e-54 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00753 2 7907880 7915544 Pste2g00753 2 7907880 7915544 ECH