Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00742 GCATCTCCGGCGTTCTCTCCGCCTTGGCTGACCAAAATTTCCTCAATTCTCAAAATTCTCTTTCAAATACTTGCTTCTTTTGTTCTTCGATTCCCCAACAACCAGGTACGTTCAATGAGTACCAGGAGCGAGATCCTCATGAGTTGCCACATTGAAAGAGCAAAAACTGAAGAAAGATTCAAAGTGGAGCATAAAGATCCAAGAATGAGCAGAAGACCACCACCTGATCCTGTGGCAGTTCTACGAGGCCATCGAGCTTCGGTCACAGACGTATCTTTTCATCCCTTTAAACCGATATTATTCTCTGGTTCTGCTGATGGCGAAGTGCGGATTTGGGATACCCTTCAGCATCGGACAGTGTCATCTGCATGGCTACATAGTGCTGCACATGGTATTGTTGCTGTTGCCAGCAGTTCTTCCCTTGGAAACAATAAATTTGGTAGGGATGGAACTGTAAAAGTTTGGGAATTTGATGATGCTGGTTTGTCCAGGATTCCATTACTTACAATCAAGACAAACACTTACCACTTTTGCAAGTTTTCCATGGTAAAGAATAATTCTTTTTGGTCTAAACAAGGGAAAGCAACAAAAGATTGCTATAGAACAGAGCTAGGAGGAACGTCTGATAGAGAAACTCAGGAGGTTAAAAGAGAAGAGGCTTATACCAGTCAAAGTTGTTCTGAAAGCTTTGGGGGGCAAAACTCTTCTGAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAAATTTGTACAACTCCCTTCAAGCAATCCTAGTAATTCTTTAGGTGCTTGCAACAAAGGGATGTGCATGGCACTTCAATTATATGAGGATGGTTCCATGCTTTGGTGGGATATACGGAATCCTGGAGTTCCAGTAACTTCTGTAAAATTCCATTCTGAGCCAGTTCTGAGCATCTGTATTGACGGCCCTTGCAAAGGGGGTATCTCAGGATCTGCAGATGACAAAATTGTAATGCACAGCTTGGATCATTCTTCGGGTACATGTGTGGTGAAGAAAGAAATCAGTTTGGACCGACCAGGCATTTCAGGCACCTCCATTCGGCCTGATGGAAAAATTGCTGCTACTGCTGGCTGGGACCACAGGGTGAGGATATATAATTACCGTAAAGGAAATGCGTTGGCTATTTTAAAGTATCACCATGGCACATGCAATGCTGTAAGTTATTCATCTGATTGTAAACTCATGGCTTCTGCATCGGAAGACACAACCGTGGGGCTATGGGAATTGTATCCTCGATTATTGCCGTTGAGGACATCCACCACGACCTTGGTGCGACTTCTACCAATGTTTCATGATTGTAACAATGAAGATCCTATGTAGGATGGATGAAAGGGAATAAAAACTAG 1367 0.4316 ASPAFSPPWLTKISSILKILFQILASFVLRFPNNQVRSMSTRSEILMSCHIERAKTEERFKVEHKDPRMSRRPPPDPVAVLRGHRASVTDVSFHPFKPILFSGSADGEVRIWDTLQHRTVSSAWLHSAAHGIVAVASSSSLGNNKFGRDGTVKVWEFDDAGLSRIPLLTIKTNTYHFCKFSMVKNNSFWSKQGKATKDCYRTELGGTSDRETQEVKREEAYTSQSCSESFGGQNSSEVEIWDLKSAEKFVQLPSSNPSNSLGACNKGMCMALQLYEDGSMLWWDIRNPGVPVTSVKFHSEPVLSICIDGPCKGGISGSADDKIVMHSLDHSSGTCVVKKEISLDRPGISGTSIRPDGKIAATAGWDHRVRIYNYRKGNALAILKYHHGTCNAVSYSSDCKLMASASEDTTVGLWELYPRLLPLRTSTTTLVRLLPMFHDCNNEDPM 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00742 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 81 122 IPR001680 GO:0005515
Pste2g00742 446 SUPERFAMILY WD40 repeat-like 63 415 IPR036322 GO:0005515
Pste2g00742 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 383 416 IPR001680 GO:0005515
Pste2g00742 446 PANTHER TRANSDUCIN BETA-LIKE 3 72 417 - -
Pste2g00742 446 ProSitePatterns Trp-Asp (WD) repeats signature. 402 416 IPR019775 -
Pste2g00742 446 Gene3D - 223 436 IPR015943 GO:0005515
Pste2g00742 446 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 81 113 - -
Pste2g00742 446 Pfam WD domain, G-beta repeat 77 113 IPR001680 GO:0005515
Pste2g00742 446 Pfam WD domain, G-beta repeat 380 414 IPR001680 GO:0005515
Pste2g00742 446 SMART WD40_4 288 327 IPR001680 GO:0005515
Pste2g00742 446 SMART WD40_4 334 373 IPR001680 GO:0005515
Pste2g00742 446 SMART WD40_4 74 113 IPR001680 GO:0005515
Pste2g00742 446 SMART WD40_4 116 156 IPR001680 GO:0005515
Pste2g00742 446 SMART WD40_4 376 415 IPR001680 GO:0005515
Pste2g00742 446 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 383 416 - -
Pste2g00742 446 Gene3D - 35 161 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00742 270 416 U-box Gene Family AT2G33340 26.490 3.38e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00742 2 7751958 7759416 Pste2g00742 2 7751958 7759416 ECH