Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00725 AAAGAAACTTGTGATCTGAGAAACAAATCCAACACAAAACCAAAACAACCTCATCTGATCTAAAAACCAAGAAACTGCATTGCACTTTCAGATATTTTGTTTGTTACTCTGTCTTTCTCTCTCTGACACCTTAATAAACATAAAGTGTCTTCATTCTCAACTCTCAAACTGAACCTTCTTCTCTCTTCTCTGTCGTAGTTTCTCTCTGTTAGCCACTATGGTTGCTGCAAATGAGAGGGTCGTCGCTGTGATCATGGTTGGAGGACCTACTAAAGGTACTAGATTCCGGCCATTGTCATTCAACGTGCCCAAGCCACTTTTTCCATTAGCAGGACAACCCATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTGCTTGGTTTCTATGAGGAACGTGAATTTGCCTTATATGTATCTTCTATCTCAAATGAGCTTAAAGTACCTGTTAGATACTTGAAGGAAGAGAGGCCACATGGTTCGGCTGGTGGCCTTTATCACTTTAGAGATCTGATTATGGAAGAGGATCCGTCACATATCTTCTTGCTGAACTGTGATGTATGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAGAAGATATGGTGGGATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCAAGCGAGTTCGGGGAATTAGTAGCTGATCCAACCACTAATGAACTATTGCATTACACTGAGAAACCTGAAACTTTTGTAAGTGATCGTATAAACTGTGGTGTGTACATATTTACACCAGATATCTTTACAGCCATTGAAGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACGAGGAGTCTTCCAGTTAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGAAAGAAGCAGTTGTACATTTATGAAACCAATGACTTTTGGGAACAAATCAAAACTCCAGGAATGTCAATAAAATGCTCCGGCTTGTATCTTGCACAATTTCGTTACACATCCCCCCATTTATTAGCGAAAGGAGATGGTATTAAGAAAGCCAGCATCACTGGTGATGTTTATATTCACCCATCAGCAAAAGTGCATCCATCTGCTAAGATTGGTCCAAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGACTGAAAAACTGTATCATCCTTGATGACGAAAATGCTGTTGTTGGTCATGCAATTATTGGATGGAAATCCTCTATTGGAAGATGGGCCTGCGCTAGTGGAGATTACAATGCAAAGCTTGGGGTAACTATACTTGGTGAATCAGTGACAGTTGAGGATGAGGTAGTGGTTTTTAATAGCATTGTTCTGCCACACAAGACCCTAAATGTGGGTGTTCAAGATGAGATTCTTTTATAGAACCTCACAGCTCCTATTGTTGGCTTTCTATTGTCCTTGTGATTGTATTTGCAGTGACTTATGTTTAATTTAATGTCTAGTTTGGAAAACCAAAAACAGTGGATATCATCCATTTTGTCACAAAATTTACTGTTTTCTCAAATCACATTCATCATAATCACTACCATTTTTTGCG 1622 0.4001 MVAANERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISACKRIPNLAQIYLLGFYEEREFALYVSSISNELKVPVRYLKEERPHGSAGGLYHFRDLIMEEDPSHIFLLNCDVCCSFPLPEMLDAHRRYGGMGTILVVKVSAESASEFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPVNYVRLDQDILSPLAGKKQLYIYETNDFWEQIKTPGMSIKCSGLYLAQFRYTSPHLLAKGDGIKKASITGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLKNCIILDDENAVVGHAIIGWKSSIGRWACASGDYNAKLGVTILGESVTVEDEVVVFNSIVLPHKTLNVGVQDEILL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00725 409 Pfam Nucleotidyl transferase 10 211 IPR005835 GO:0009058
Pste2g00725 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 276 IPR029044 -
Pste2g00725 409 CDD M1P_guanylylT_A_like_N 10 274 - -
Pste2g00725 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 341 IPR029044 -
Pste2g00725 409 Gene3D Hexapeptide repeat proteins 286 404 - -
Pste2g00725 409 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Pste2g00725 409 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00725 Pste-Chr2 7629561 7636592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00725 2 393 Eukaryotic Initiation Factors Gene Family AT2G34970 21.759 3.00e-07 50.8