LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g00724	ATAATACATAGAGCAACATAGAAAGCACTGAGTGAAATGGCAAATTCAGTACCCACTAGAGAGCTTTTCATTGATGGCGAGTGGAAAGTCCCAGTTCTCAACAACCGAATTCCGATCATCAACCCCGCCACTGAAGACATTATAGGACATATACCAGCTGCTACTAAGGAAGATGTTGACCTTGCAGTGGATGCGGCTAAAAGAGCCTTTTCCCGCAACAAAGGAGCTTATTGGTCTTCAGCTCCTGGCTCTGTTCGTGCCAGCTATCTTCGAGCCATCGCCTCAAAGATAACGGAGAAAAAGGATGAACTAGGAAAGCTTGAAGCAATTGATTGTGGAAAGCCACTAGAGGAAGCCTTGGCAGACCTGCTGGCTGAAGGGTTGGATGCAAAGCAGAAGGCTCCTGTATCCCTTCCAATGGAGAACTTCAAGAGTTATGTTCTCAAGGAGCCCATTGGGGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTTGATGGCTACTTGGAAAGTAGCTCCTGCTCTGGCTGCTGGTTGCACCGCAATATTGAAGCCATCTGAATTGGCGTCTGTGACCTGTTTGGAGCTGGCTGAAATATGCAGAGAAGTGGACCTTCCTCCAGGGGTATTAAATATTGTCACTGGATTAGGCAATGAAGCTGGTGCTCCTTTGGCATCTCATCCTGATGTAGACAAGATTGCCTTTACTGGAAGCTCTGCAACTGGAAGCAAGATTATGACAGCTGCAGCACAGCTAACCAAGCCTGTTTCTCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGACTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATATGCAGTGCAACTTCTCGCCTTATTGTGCATGAAAGTATAGCTACAGAATTTGTGAACAGGCTTGTGAAATGGGCCAAAAAGATAAAAATTTCAGATCCGTTGGAAGAAGGTTGCAAGCTAGGCCCTATTGTTAGTGAAGGACAGTATAAAAAAGTGTTGAATTTTATCTCTACTGCTAAGAGTGAGGGTGCAACAATTTTGACTGGAGGGTCTCGCCCAGAGCATTTAAAAAAAGGGTACTTTGTTGAACCAACCATAGTAACTGATGTGACTACCTCAATGCAAATATGGAGACAAGAAGTTTTTGGACCTGTACTCTCTGTGAAAACATTCAGTACCGAGGAAGAAGCTATTGAACTCGCAAATGACACACAGCTATTCAAGCTGGAATTGGGACTGGAGAACTATTTAAGTGTGAAGCAAGTGACTAAGTACATATCTGATGAACCTTGGGGCTGGTATCAGTCTCCTTCAAAGCTGTGAAATTCTAAAACCTGGCATGGATAATGTGTGGGGAACACTAAGTTGTGCAATGATTTTAATTCCAGAAAATAATATGTACATGTAAACAATAAAATTGTTTCATGGCCATCTTAAATTGTTAATGATGGGTTGTGTTGATTCTATATTATTATTAGTTTTGGAGAAAGTTTAGATCGATTTCT	1544	0.4242	MANSVPTRELFIDGEWKVPVLNNRIPIINPATEDIIGHIPAATKEDVDLAVDAAKRAFSRNKGAYWSSAPGSVRASYLRAIASKITEKKDELGKLEAIDCGKPLEEALADLLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCTAILKPSELASVTCLELAEICREVDLPPGVLNIVTGLGNEAGAPLASHPDVDKIAFTGSSATGSKIMTAAAQLTKPVSLELGGKSPIIVFEDVDLDKTAEWTIFGCFFTNGQICSATSRLIVHESIATEFVNRLVKWAKKIKISDPLEEGCKLGPIVSEGQYKKVLNFISTAKSEGATILTGGSRPEHLKKGYFVEPTIVTDVTTSMQIWRQEVFGPVLSVKTFSTEEEAIELANDTQLFKLELGLENYLSVKQVTKYISDEPWGWYQSPSKL	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g00724	441	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	24	254	IPR016162	GO:0016491
	Pste2g00724	441	PANTHER	ALDEHYDE DEHYDROGENASE	4	406	-	-
	Pste2g00724	441	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	275	286	IPR016160	GO:0016491
	Pste2g00724	441	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	255	406	IPR016163	GO:0016620
	Pste2g00724	441	ProSitePatterns	Aldehyde dehydrogenases glutamic acid active site.	247	254	IPR029510	GO:0016491
	Pste2g00724	441	SUPERFAMILY	ALDH-like	4	406	IPR016161	GO:0016491
	Pste2g00724	441	FunFam	Betaine aldehyde dehydrogenase	251	427	-	-
	Pste2g00724	441	Pfam	Aldehyde dehydrogenase family	23	406	IPR015590	GO:0016491
	Pste2g00724	441	FunFam	NAD/NADP-dependent betaine aldehyde dehydrogenase	12	265	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g00724	Pste-Chr2	7609264	7616372	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g00724	1	439	Aldehyde Dehydrogenase Gene Family	AT1G74920	67.864	0.0	686