Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00720 AACGGAGGAGCAAGAAAAGAAAAAATGGTAAGTGGAAGAAGAGAAAGTGGCATCTCGTAGGTGCAGGCAGATACAGACACAATCCGGTAAAACTCGACCTTAGTACCGCACTCTCTGCCGCAGAGGTTTTCTTTTTATCTAGTACTCGGTATCCCTATGTATAAGCATGGACTTCCTGGCATACTGTTGTTTGATTAATAAAGTTCTGTATTGGTTGAGTAAGCCTAGAATCAATATTTAGTTTTTTCCTACCTTTTGTGGGTTTCTGATGGATGATGCTGGGCATCGTGAAAATGGAAGACACAAAGCAGCAGCAGATCAATTCAAATCTACTCAGGGACAGCCATCAATGAAGCAGATTATGGCAATTATGGCCGAAAGAGATGCGGCCATTCAAGAAAGAAATCTGGCCATTTCTGAGAAAAAGGCAGCATATGCTGAGCGTGATATGGCATTCCTGCAGCGAGATGCTGCAATTGCAGAACGAAATAATGCAATTTTGGAGCGAGATAATGCAATTGCAACTCTTCAGTATCGAGAAACCTCCTTAGGTAGTGGCAGTATGCCATCATGCCCTCCAGGATGCCAAATTTCACGTGGTGTCAAGCATATGCATCATCCCCAGCAACAGGTACACCATATGCCTAATATGGGTGATGCTTCTTACAGCTCACGGGAAATGCACCCAACCGATGCCCTCCCCCCTGCTCCCATCCCTTCTGAGTCTGGCAAATCAAGGCGGGCCAAGCGACCAAAGGAAGCGAAATCAACTTCACCTAATAAGAAGACTTCAAAAGCAACAAAAAAAGTCAAGAAGGAGAGCGAAGATTTGAATAAGGTTATGTTTGGCAAGCCACATGAATGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGCTAGTAGTGTCAAAGGCTGATTGGAAAGGTCAGGACTTGGGGTTGAATCAAGTGGCTTATGACGAGTCAACCATGCCAGCACCAGTATGTTCTTGTACTGGGGTCCTGAGGCAGTGTTACAAATGGGGTAATGGGGGTTGGCAGTCTGCGTGTTGCACAACTACTCTCTCAATGTATCCCCTTCCTGCAGTGCCCAACAAGAGACATGCCCGGGTAGGTGGTCGGAAGATGAGCGGGAGTGCTTTCAACAAGCTGCTCAGTCGCCTTGCAGCCGAAGGTCATGATCTATCAAATCCTGTTGACCTCAAGGACCATTGGGCCAAACACGGAACAAACCGCTACATCACAATAAAGTAG 1270 0.4606 MDDAGHRENGRHKAAADQFKSTQGQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAIATLQYRETSLGSGSMPSCPPGCQISRGVKHMHHPQQQVHHMPNMGDASYSSREMHPTDALPPAPIPSESGKSRRAKRPKEAKSTSPNKKTSKATKKVKKESEDLNKVMFGKPHEWKSGQEMVNGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00720 333 PANTHER - 1 333 IPR010409 -
Pste2g00720 333 SMART GAGA_bind_2 1 333 IPR010409 -
Pste2g00720 333 Coils Coil 54 81 - -
Pste2g00720 333 MobiDBLite consensus disorder prediction 1 15 - -
Pste2g00720 333 MobiDBLite consensus disorder prediction 154 170 - -
Pste2g00720 333 MobiDBLite consensus disorder prediction 113 186 - -
Pste2g00720 333 Pfam GAGA binding protein-like family 1 333 IPR010409 -
Pste2g00720 333 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00720 Pste-Chr2 7580688 7585800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00720 61 333 BBR or BPC Transcription factor family AT5G42520 65.862 1.16e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pste2g00720 GAGA_bind 9.2e-109 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00720 2 7580688 7585800 Pste2g00720 2 7580688 7585800 ECH