Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00718 ATGGACAATGTTGATAAAAATAATAATAATAATAATTGTGCATTTAGTGTTCTAGTTCCAAAACCACCAAATCAAAAACCTTTTATACCAGTCTCTCACCCTAATATCAATATTCCACCTTCACCAACTCCTTATTCCCAATATTCTCAGCGGTTATGTTCTCCCAATTCCTCCCATTCAAGGTCCCTATCTCAACCTTCCATTTTCTCATCGGATTCTTTGCCCCCATTGATTCCTTCTCCTACTGATGTTGTTGCCTCCATGTTTAACTCAGTTTCAACAAATAATATGTTTGTTGAGGAAAATAATGTTTCTTTTCATTCTCCTTCCATGCCCCTCAATAGAGGGCATCCCCTTCTTCCTCCTAGGAAAGGACATAGACGCTCTAGTAGTGATTCCCCTTTGGGAATCTCTGGTTTTTTGTTGTCTTCTGTGGTTTCCTCTAGAGGAGAGACCTCAGGGTTTGACAAGCCCATTCAATTGGTCTTGAAGTCATCGGTTAGGGACAACCTGGATGGGGACTACGTTAATGAGCCTAGGAGGAAAAAGGAGGTTGCGAATGATCTGTTTAGGGAATACATGAATTTGGATAACATTGATAAATTAAACTTTATTAACGTGGAAGATAAGGATTTGGATAGCAGGACTAGTGGTGATAATGAAGTTGAGAGTGATGTGAATGGGAAGGGGAGTGGTGCTCACGGGGCAACTTCCAACTATTCAGGGGAAAGGAAGAAAGGAGTCAAGAGCTCGAATGGAGATGTTGTACCGGATTCCCGACATAGAAGGAATTTCTCATTAGATAGTTCCACAGGAAACTTTTACATTGAAAATGGATTACCTAAGCTTCCTCCTTTGAAAAGTCAAGTTGATCACCACTCACCTAGCAATTCAATGGATAGAAAAATGTCTAAAACCAACATGGAGTTTGGAAATGATGAATTCAGTGCAGAGGAGCTAAAAAAAATAATGGAAAGTGATAAACTTGCTGAAATTGCCTTGATTGATCCCAAACGTGCAAAAAGGATTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGAGAAAGATGCGATACATTGTTGAATTAGAACACAAAGTGCAAACTCTTGAGACAGAGACAACAATGTTGTCTACTCAATTTTCCAAATTACAGAAGGATAACTCTGAGCTTAAAAATAAGAACAACGAGTACAAATTAAAACTTCAAGCAATGGAACAACAATCTCAATTGAAAGATGCTTTGAATGAGACATTGGATGTTGAAGTCCGACGTTTGAGGCGTTCTGTTGCAAAACTTGGAGGGGAATTCCCCATGAAAAACATGACTCGACAACTTTCTATTAACCCACAAATGTTCCAGTTACAACGTCAGCAACCCATCTTGCAAAGACATTTTCTACTGCAAAATCAGCTTACTCAGGAAGAGATAGAGTCTCGATCACAACATATTCAAGGCAATGAATTGCATCCCCAAGAACAGATCCATCATAATGAGTTGCATCCCCAAAAGTAA 1518 0.3926 MDNVDKNNNNNNCAFSVLVPKPPNQKPFIPVSHPNINIPPSPTPYSQYSQRLCSPNSSHSRSLSQPSIFSSDSLPPLIPSPTDVVASMFNSVSTNNMFVEENNVSFHSPSMPLNRGHPLLPPRKGHRRSSSDSPLGISGFLLSSVVSSRGETSGFDKPIQLVLKSSVRDNLDGDYVNEPRRKKEVANDLFREYMNLDNIDKLNFINVEDKDLDSRTSGDNEVESDVNGKGSGAHGATSNYSGERKKGVKSSNGDVVPDSRHRRNFSLDSSTGNFYIENGLPKLPPLKSQVDHHSPSNSMDRKMSKTNMEFGNDEFSAEELKKIMESDKLAEIALIDPKRAKRILANRQSAARSKERKMRYIVELEHKVQTLETETTMLSTQFSKLQKDNSELKNKNNEYKLKLQAMEQQSQLKDALNETLDVEVRRLRRSVAKLGGEFPMKNMTRQLSINPQMFQLQRQQPILQRHFLLQNQLTQEEIESRSQHIQGNELHPQEQIHHNELHPQK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00718 505 Coils Coil 382 409 - -
Pste2g00718 505 Gene3D - 338 391 - -
Pste2g00718 505 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 60 488 - -
Pste2g00718 505 SMART brlzneu 334 398 IPR004827 GO:0003700|GO:0006355
Pste2g00718 505 MobiDBLite consensus disorder prediction 211 304 - -
Pste2g00718 505 MobiDBLite consensus disorder prediction 231 246 - -
Pste2g00718 505 MobiDBLite consensus disorder prediction 491 505 - -
Pste2g00718 505 Pfam bZIP transcription factor 338 396 IPR004827 GO:0003700|GO:0006355
Pste2g00718 505 MobiDBLite consensus disorder prediction 26 74 - -
Pste2g00718 505 Coils Coil 354 374 - -
Pste2g00718 505 SUPERFAMILY Leucine zipper domain 338 394 IPR046347 GO:0003700|GO:0006355
Pste2g00718 505 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 399 IPR004827 GO:0003700|GO:0006355
Pste2g00718 505 MobiDBLite consensus disorder prediction 247 265 - -
Pste2g00718 505 MobiDBLite consensus disorder prediction 480 505 - -
Pste2g00718 505 MobiDBLite consensus disorder prediction 26 41 - -
Pste2g00718 505 MobiDBLite consensus disorder prediction 42 74 - -
Pste2g00718 505 CDD bZIP_plant_RF2 339 389 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00718 Pste-Chr2 7566959 7569436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00718 29 455 bZIP Transcription Factor Family AT4G38900 43.284 8.63e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste2g00718 bZIP_1 9.9e-12 CL0018