Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00680 CACCCTTTTGTGTTAATGTTATTGTGCTTGCTGTGCTGCATCATATCATCTCATATCCCATTCACTAAGTCACCACCAAGACATGGAAGCCAGCGCTGGACTAGTCGCTGGGTCACATAACCGCAACGAGCTGGTTGTCATCACTGGCCATGAAGAGCCCAAGGCTTTGAAGAACTTAGATGGCCAAGTGTGTGAGATTTGTGGTGATGGTGTGGGACTCACGGTGGATGGAGACTTGTTTGTGGCTTGCAATGAGTGTGGTTTTCCAGTGTGCAGACCTTGCTATGAGTATGAAAGAAGAGAAGGGAGCCAGCTTTGCCCTCAGTGTAAGACCAGATACAAGCGTCTCAAAGGGAGTCCTCGGGTGGAGGGAGATGATGATGAGGAGGATGTGGATGATATTGAGCATGAATTCAATATTGATGACCAAAAGAACAAGCATGGCCATGCTGCTGAAGCCATGCTTCATGGGAAGATGAGCTATGGAAGAGGTCCTGAAGATGATGAGAATTCCCAGTTCTCAATACCTGTAATCTCTGGTGGTCGTTCTAGGCCTGTAAGTGGAGAGTTCCCAATATCATCTAATGGTTATGGGGAACAGATGTTATCTTCTTCATTGCATAAAAGAGTGCATCCATATCCAGTGTCTGAATCTGAGGATGGATGGAAAGATAGAATGGAGGACTGGAAATTGCAGCAAGGCAATTTGGGGCCTGAACCTGATGAAGATCCAGATGCAGCCCTGTTAGATGAAGCAAGACAACCACTCTCAAGGAAAGTGCCAATAGCATCTAGCAAAATCAATCCATATAGGATGGTGATTGTGGCTCGCCTTGTCATTCTTGCTTTCTTCCTCAGATACAGACTTATGAACCCTGTACGTGATGCAATGGGGCTATGGCTAACTTCTATCATATGTGAGATCTGGTTTGCTTTTTCATGGATTCTGGATCAGTTTCCCAAATGGTTTCCCATTGATCGAGAAACCTACCTTGACCGTCTTTCCATCAGGTATGAGCGTGAAGGTGAACCAAACATGCTTGCTCCTGTAGATGTCTTTGTTAGTACTGTGGATCCCATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTATCAATCTTGGCCATGGATTACCCAGTTGATAAGATATCATGCTACATTTCTGATGATGGAGCCTCAATGTGTACATTTGAGTCTCTTTCAGAAACTGCAGAGTTTGCTAGGAAGTGGGTACCGTTTTGTAAGAAATTTTCTATAGAACCTCGTGCACCTGAGATGTACTTCAGTGAAAAGATTGATTACCTAAAAGACAAAGTGCAACCCACCTTTGTTAAGGAGCGTCGAGCCATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGATCAATGCACTTGTTGCAAAAGCACAGAAAGTTCCTCAAGGAGGATGGATTATGCAAGATGGGACACCATGGCCAGGGAACAACACTAAGGATCACCCTGGTATGATTCAAGTGTTTCTTGGTAGCAGTGGAGGTCTTGATACTGAAGGAAACCAGCTTCCTCGTCTTGTTTATGTTTCTAGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGGGTATCTGCTGTTCTCACAAATGCTCCTTTCATGTTGAACTTGGATTGTGATCACTATATCAATAACAGCAAGGCTGCCCGAGAGGCCATGTGCTTTTTGATGGACCCCCAAACTGGGAAGAAGGTCTGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATACACATGATCGTTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAAGGTCCTGCGTATGTGGGGACTGGATGTGTCTTCAGGAGGCAAGCTCTGTATGGCTATAATCCTCCTAAGGGTCCCAAGCGTCCAAAAATGGTAAGCTGTGACTGTTGCCCATGTTTTGGAAGCCGGAAGAAGTATAAGGAAAAGAGTGATGCAAATGGAGAGGCTGCAAGCCTAAAAGGGATGGATGATGACAAAGAGGTGTTGATGTCCCAAATGAATTTTGAGAAGAAATTTGGACAGTCCTCTATTTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTTCCTCCTTCTTCAAGTCCAGCTGCCCTTCTTAAAGAAGCCATTCATGTGATTAGTTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGCTTGGTTGGATCTACGGATCTATCACAGAAGATATTCTAACAGGTTTTAAGATGCATTGCCGCGGGTGGAGATCCATTTACTGTATGCCAAAGAGGGCTGCATTCAAGGGTACTGCTCCTATCAACTTGTCAGATCGTCTCAACCAGGTGCTTCGTTGGGCTCTTGGTTCCATTGAGATTTTCTTCAGTCATCATTGCCCCCTATGGTATGGTTTCAAGGAAAAGAAGCTAAAGTGGCTTGAGAGATTTGCCTATGCTAACACGACTGTCTATCCATTCACCTCTATTCCTCTGGTTGCCTATTGTATTCTTCCTGCAGTTTGCTTACTCACTGACAAATTCATCATGCCACCGATTAGCACCTTTGCTGGTTTGTACTTTGTTGCTCTCTTCTCTTCAATCATTGCAACTGGTATTCTTGAGTTGAAATGGAGTGGAGTGAGCATTGAGGAATGGTGGAGAAATGAGCAGTTTTGGGTCATTGGTGGTGTATCAGCTCATCTCTTTGCTGTTATACAAGGTCTTCTAAAGGTTTTGGCTGGAATTGACACCAACTTCACTGTTACATCCAAGGCAGCAGATGATGAAGAGTTTGGAGAATTATACACCTTTAAGTGGACTACTCTACTAATTCCTCCAACCACCATCTTGATCATTAACATCGTTGGTGTTGTTGCTGGAATCTCAGATGCCATAAACAATGGATACCAATCTTGGGGACCACTGTTTGGAAAGCTATTCTTTTCCTTCTGGGTGATTGTCCATCTGTATCCATTCCTTAAAGGTTTGATGGGTCGACAAAACCGCACTCCCACCATTGTTGTGATTTGGTCAGTGCTATTGGCTTCTATTTTCTCCTTGTTGTGGCCTAAGCCTGTGAAGAACTTGGATGGTCAGCTCTGTGAGATATGTGGTGATTCTGTGGGAGTTACGGTGGACGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGTTTCCCTGTATGCAGGCCATGTTATGAGTATGAAAGAAGGGAAGGGACTCAATACAGAATCTTCCACCCAGTACCTGATGCAGTTGGCCTATGGTTCATATCTGTGACATGTGAAATTTGGCTTGCATTATCCTGGTTGATTGATCAGATTCCAAAATGGTTCCCCATTGATCGCGAGACGTATCTTGATCGTCTTTCAATCAGATTTGAACCGGAGAACAAGCCCAATATGCTTTCTCCAATAGATATAATTGTCACAACTGTTGATCCAATCAAGGAACCTCCTCTAGTTACAGCCAACACTGTTCTTTCAATCTTAGCTCTAGATTACCCTGCTGACAAAATCACATGCTACGTTTCTGATGATGGAGCTTCCATGCTTACCTTTGAAGCTCTTCAACAAACGGCTGAGTTTTCAAGAAAGTGGGTACCCTTTTGCAAAAAATTCTCTGTAGAACCTAGAGCTCCAGAAAAGTACTTCTCAGAGAAGATAGATTTTCTAAAGGATAAGCTTCAGTCCACTTATGTAAAAGAACGCCGTACTATGAAGAGAGAATATGAAGAGTTTAAGGTGAGGATAAATGCACTAGTGGCTAAATCCATGCGAGTTCCCCCAGAGGGGTGGACTATGAAAGACGAGACACCATGGCCAGGAAACAACCCCAAAGACCATCCAAGTATGATACAAGTCCTTCTTCCTCACAATGTAGATAGTGAACTTCCCTGTCTTATCTACACATCTCGCGAGAAAAGGCCTGCATTTCAACACCACAGCAAAGCTGGAGCAATCAATGCCTTGCTTCGCGTATCAGCAGTGTTAAGCAATGCTCCTTTTGTGCTCAACTTGGATTGCAATCATTATGCAAATAACAGCAAAGCCGTGAGAGAGGCCATGTGTTTCTTCATGGACATACAACTTGGGAATGGCATTGGCTTTGTACAGTTTCCAGTAAGATTTGACAGCCTCGATAGGAATGATCGTTATGCCAACAAAAACACTGTTCTATTTGATATTAACTTGAGGTGCCTAGATGGAATTCAGGGACCTACTTATATTGGTTCAGCATGTATCTTCAGAAGGAAAGCCTTAACTGGCTTTGATTCTCCAAAGGCTTCAAAACGCCCCAGCATGGTGCAAGTACACTCAAAACAGGATGAGAATGGAGAAGAAGCAACCATAACAGCAGCAACAGATGAGGACAAGGAGCTGCTGAAATCAGAGACTAATGATGAAAATAAATTTGGGAAATCCACACTTTTCATGAACTCTTCATTAACAGAAGAAGGTGGTGTTGATCCTTCTTCCAGTCAGGAAGCCCTGCTTAAAGAAGCTATTCATGTCATGAGTTCTAAATATGAAGACAGAACTCTCTGGGGATACGAGGTGGGTTTAAGCTATGAATCTATAGCAGCAGATACTCTGACAAGTTTGAAGATGCATTGTCGTGGTTGGAGATCTGTTTACTGCATGCCAAAGAGAGACCCTTTTAGGGGTACAGCTCCCATCAACCTCACAGATAGACTTAACCAGGTGCTAAGATGGGCAGTGGGATCACTTCAGATCCTATTCAGCAACCATTGCCCACTTTTCTATGGCCTCAATGGAGGAAGACTCAAAGGACTCCAAAGGATTGTAGACACCTTTGCAAGTCTAATATTTATTGCATTGTTCATCACAATCTTTGCCTCGGCAATTCTTGAATTGAGATGGAGTGGAGTTAGCCTTGAGGAATGGTGGAGAAGCCAGCAATTCTGGGTCATTGGCAGTGTGTCTGCAAACCTCTTTGCTGTTATGCAAGGCATCATGGGAGCCCTGCCACTGGGTAGAGTCAACACAAACTTCAGCATTGTATCAAAGGCTCCAGATGATGTAGAGTTTCGTGAACTCTATGCCATTAGATGGACTGCACTCCTAATACCTCCAACCACTGTCACAATAATCAACCTTGTTGGTATTGTGGCTGGTTTCACAGATGCCATAAACAGTGGCGAACATTCTTGGGGAGCACTTCTTGGGAAACTCTTCTTTTCTTTGTGGGTTATTGTCCATTTGTACCCTTTCCTTAAAGGTCTAATGGGTAGGCAGAATAGAACACCAACTCTTATTGTCATATGGTCTGTGCTCTTGGCTTCTATCTTCTCCTTGGTTTGGGTGAGAGTTGACCCTTTTGTGTTGAAAACAAAGGGGCCTGATGTTAAGCAATGTGGAATCAGTTGC 5428 0.4361 MEASAGLVAGSHNRNELVVITGHEEPKALKNLDGQVCEICGDGVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNIDDQKNKHGHAAEAMLHGKMSYGRGPEDDENSQFSIPVISGGRSRPVSGEFPISSNGYGEQMLSSSLHKRVHPYPVSESEDGWKDRMEDWKLQQGNLGPEPDEDPDAALLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRLMNPVRDAMGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMCTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSSGGLDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKYKEKSDANGEAASLKGMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGFKEKKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFAGLYFVALFSSIIATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWPKPVKNLDGQLCEICGDSVGVTVDGDLFVACEECGFPVCRPCYEYERREGTQYRIFHPVPDAVGLWFISVTCEIWLALSWLIDQIPKWFPIDRETYLDRLSIRFEPENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKITCYVSDDGASMLTFEALQQTAEFSRKWVPFCKKFSVEPRAPEKYFSEKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNPKDHPSMIQVLLPHNVDSELPCLIYTSREKRPAFQHHSKAGAINALLRVSAVLSNAPFVLNLDCNHYANNSKAVREAMCFFMDIQLGNGIGFVQFPVRFDSLDRNDRYANKNTVLFDINLRCLDGIQGPTYIGSACIFRRKALTGFDSPKASKRPSMVQVHSKQDENGEEATITAATDEDKELLKSETNDENKFGKSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVMSSKYEDRTLWGYEVGLSYESIAADTLTSLKMHCRGWRSVYCMPKRDPFRGTAPINLTDRLNQVLRWAVGSLQILFSNHCPLFYGLNGGRLKGLQRIVDTFASLIFIALFITIFASAILELRWSGVSLEEWWRSQQFWVIGSVSANLFAVMQGIMGALPLGRVNTNFSIVSKAPDDVEFRELYAIRWTALLIPPTTVTIINLVGIVAGFTDAINSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00680 1782 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1276 1411 IPR029044 -
Pste2g00680 1782 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 477 614 IPR029044 -
Pste2g00680 1782 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1113 1220 IPR029044 -
Pste2g00680 1782 SUPERFAMILY Nucleotide-diphospho-sugar transferases 336 842 IPR029044 -
Pste2g00680 1782 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Pste2g00680 1782 SUPERFAMILY RING/U-box 22 107 - -
Pste2g00680 1782 CDD mRING-HC-C4C4_CesA 35 85 - -
Pste2g00680 1782 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1124 1613 IPR029044 -
Pste2g00680 1782 SUPERFAMILY RING/U-box 1009 1061 - -
Pste2g00680 1782 Coils Coil 1222 1242 - -
Pste2g00680 1782 FunFam Cellulose synthase 440 614 - -
Pste2g00680 1782 SMART ring_2 1020 1080 IPR001841 -
Pste2g00680 1782 SMART ring_2 37 82 IPR001841 -
Pste2g00680 1782 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1007 1062 IPR013083 -
Pste2g00680 1782 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Pste2g00680 1782 Coils Coil 421 441 - -
Pste2g00680 1782 CDD mRING-HC-C4C4_CesA 1018 1060 - -
Pste2g00680 1782 Pfam Zinc-binding RING-finger 1010 1060 IPR027934 -
Pste2g00680 1782 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Pste2g00680 1782 FunFam Cellulose synthase 19 110 - -
Pste2g00680 1782 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1060 1587 - -
Pste2g00680 1782 MobiDBLite consensus disorder prediction 1412 1433 - -
Pste2g00680 1782 Pfam Cellulose synthase 323 1009 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste2g00680 1782 Pfam Cellulose synthase 1124 1587 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste2g00680 1782 Pfam Cellulose synthase 1589 1776 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00680 Pste-Chr2 7049400 7067254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00680 1060 1782 Cell Wall Biosynthesis AT5G17420 63.578 0.0 1037