Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00679 GTACGATACCGAAGTTTTCGTGTTGTTCTTGGGGTAGAACAAGAAGCAGGCACAGGTTATAAGTGAGAGAGGGGGGATGGGTATCATGATAAAGGGAGAAATAGAGAAGGTTAATGCGAAGGGACTGAATTACAGTGACTTTGTGGAGAGATATATGGAGAAGAACCAGCCTGTGGTACTCACTGGACTAATGGACCCTCATCATTGGAGAGCTTCCACTGACTGGGTCACACATCGTGCCCAACCCAACTTTCAATTTTCTCAACTCATTTCAGGGCTTCAAAGTTCAGCACTGTGCCTTCAACTTGAGGAAGCTTCTGCTGTTCAATGTAGTAATAAAAATAGTGCAAGTAATGGGGCTTCTGTATCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCTGAATATGTAGCATACGTCACTCCCATGTTCTTTTGTGATGATTGGCTCAACCTGTATCTTGACAACTTCAGAATGCATATTGATTCTGACACACAACAACCAAATGAGGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGATCCTGGACTCCTCTTCATGCTGATGTTTTCATGTCATATAGCTGGTCAGCAAATGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTTTCAAACTCAAAGTTTCCTGATTTTAGCAAGGCTATCTGGTTAGAATGCACACAAGATGCAGGTGAAATTATTTTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCCATAAACCACAATTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAGAGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTCTGCCAGCGCAACCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACTTTCATGGTATACTTCACCTTGGCCAACTTGGTTTTGCTTCGTTATATAAATAGAAGATATGGAAGTACAACGGGGAGTTCGTCAACAATAGCTCAGCATTTATCAATGAATCTTGGGAGTTTAAGGAAGAGTGCATCAGAGATGAAACACATGCGAGCTCTAGAAGGAAATCACAATTGTGTTGTGAATATGATGAAAGCACTCGAAGATCCTAGATTTTCCAAATTATGCATGCACGTAGCAAGAACATATATAATAATACACGAGCAATCTGACTTGTCCTCTGATTTTGAGAGTCCTTCAATGAGTGATCTGGTGAACCTTAATGATGTAAAATCATATCCATGTCAGATCTACGCACCTGAAGATCTAATTAAATTTATAGACAATGGTGTTGCAGAACTGGGTAACTATTTTATTGAGCCATCTATACTCCATGGTGCTTGAATGTCCTTTTTAAAATTCATGTCTGGCAAATGATTATTGCACTTGAAGTTGGGACCACTTACTGCAGTCATGCAATTTTCAACTCTTTCCTTTCTTATGTGAGACAAGAATGTTATCACCCAACTTGCAGTAGTTTAAGTAAGCTTTACTGATCACTCCTATTTTTACTCTTTAACTGACCTCTCCTACATAGATATCTCTCATTTTATGCTCAATTGAGTCGCCCTTTCGTGTTCATGTGGTTTCATAGTTTTGCTTGTCCCTTGCTTTCTAGTTTTCTATACTTGCCCTTTTGGCTGGTTAGAAATCAATGCCTCTTTGATTAAAAGTGTCCAATTTTCTGTACATTACGATTGTTGATTCTTCATTTTCATGGTACCTACAAGTTTTGTAGATGTATTTGGTTGA 1816 0.3838 MGIMIKGEIEKVNAKGLNYSDFVERYMEKNQPVVLTGLMDPHHWRASTDWVTHRAQPNFQFSQLISGLQSSALCLQLEEASAVQCSNKNSASNGASVSVPYLKDWHFVKEYPEYVAYVTPMFFCDDWLNLYLDNFRMHIDSDTQQPNEEICCSDYRFVYMGDPGLLFMLMFSCHIAGQQMNMKNCVYNIFDEVSNSKFPDFSKAIWLECTQDAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAREYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFMVYFTLANLVLLRYINRRYGSTTGSSSTIAQHLSMNLGSLRKSASEMKHMRALEGNHNCVVNMMKALEDPRFSKLCMHVARTYIIIHEQSDLSSDFESPSMSDLVNLNDVKSYPCQIYAPEDLIKFIDNGVAELGNYFIEPSILHGA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00679 443 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 164 - -
Pste2g00679 443 SUPERFAMILY Clavaminate synthase-like 19 269 - -
Pste2g00679 443 Gene3D Cupin 172 242 - -
Pste2g00679 443 Gene3D Cupin 3 171 - -
Pste2g00679 443 ProSiteProfiles JmjC domain profile. 97 257 IPR003347 -
Pste2g00679 443 Pfam Cupin-like domain 190 240 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00679 Pste-Chr2 7046570 7050880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00679 7 249 Glycosyltransferase AT1G78280 23.048 3.83e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste2g00679 Cupin_8 2e-10 CL0029