Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00672 TTGAGTCAAAGATACGAAAGGAATAATGTCAAGTCTAACACAAGCAAGATCGAAATAGCTCCTGGTACGATCCAAACAGCTTATCTTCCCCCTCCAGTTCAAACCGAGCCTAGCCCAAGAGGAAAGCAAAATTCTAAATCAAAAGTTTCAAGAAATGCAAAGTCTGGAACTCACAAACCAAGTGCTGATTCCCCTAGTTCGATTGCAGTTAACAACTGCCGTTATGACAGTTCTTTAGGACTGTTAACGAAGAAATTTGTTAGCTTGATCCAGGATGCTAAGGACGGCACCCTAGATCTAAATAAAACCGCTGAGATCTTGAGGTACAGAAAAGAAGAATTTATGATATTACAAATGTTCTTGAAGGAGGGATGCGATGGACTTGGGCCACGAGAACTAGAAGACCAAGTTAACAGTCTAAAGGCTGAAGTTGAAAGTCTATATGCCGAGGAATGCGAACTTGATGATTGTATAAGGAAAAAGCAGGAACTTATAAGAAACATGGAGGAAAGGGAAAGCTCTCAAAAGTACCTGTTTTTTAGCAAGGAAGATATTCTCAGTCTTCCATGCTTCCAGAATCAAGAAATTATTGCAATCAAGGCTCCAAAAGCTAGTTTCATCGAGGTCCCTGATCCTGATGAGGAATTAGGTTTCCGGCAAAAGCAGTATAAAATGATTGTTAGAAGTGCTACTGGACCAATATCTTTGTACCTCTTGAGCAATGATGACCGCAAGTTTGAGGATGATAGTGTCAAAAGGGTGAAAATAATGGATCCATCATGGAACAATGATCACCACAGAAAGAAGGGTGTGGGACTATTAGAAAGCCAAGGTGATAAAAAAAATCATTCTGAGAGTTTCAGTTTGCATGGGTCACAAGCATTTGGAATTCAAAAATTACTCCCTCGGACTTTGAAATGGAAGATGACTATTGGTTTCAATCAGAGTCTGGAGTGAGCCTAACAGAATTGTGGAGTAGCAATATCTTCTAAACTAATCCTCATCTGGATGCAACTATGCAAAGTGACCAATTTAAAGCTCATATTAATGAATGCTCTTTTTGTTCGATAGATGAACTTCAAGAAGATTAATCCAACAAAGAGTCTATGGGATTTGCCAAAACAGAAGATTCACTAACAGATACTATCAATAAGTAAGAGACACTATTAATTGTTCCATATGACACAAAGGGTACATTCAAGCTGTACATTGTATCTCTCTTTTTTTCTTTTTTTTTTTCTCTTTTCTATCAACAGTTGCCTTAGCTAGGATACTTGTGTCCTAGTTCTACACTTG 1296 0.3827 LSQRYERNNVKSNTSKIEIAPGTIQTAYLPPPVQTEPSPRGKQNSKSKVSRNAKSGTHKPSADSPSSIAVNNCRYDSSLGLLTKKFVSLIQDAKDGTLDLNKTAEILRYRKEEFMILQMFLKEGCDGLGPRELEDQVNSLKAEVESLYAEECELDDCIRKKQELIRNMEERESSQKYLFFSKEDILSLPCFQNQEIIAIKAPKASFIEVPDPDEELGFRQKQYKMIVRSATGPISLYLLSNDDRKFEDDSVKRVKIMDPSWNNDHHRKKGVGLLESQGDKKNHSESFSLHGSQAFGIQKLLPRTLKWKMTIGFNQSLE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00672 318 SMART E2F_TDP_2 74 118 IPR003316 GO:0005667|GO:0006355
Pste2g00672 318 MobiDBLite consensus disorder prediction 1 21 - -
Pste2g00672 318 MobiDBLite consensus disorder prediction 1 69 - -
Pste2g00672 318 SUPERFAMILY E2F-DP heterodimerization region 135 242 IPR037241 -
Pste2g00672 318 MobiDBLite consensus disorder prediction 38 69 - -
Pste2g00672 318 CDD E2F_DD 135 242 IPR032198 GO:0046983
Pste2g00672 318 Gene3D - 131 242 - -
Pste2g00672 318 PANTHER TRANSCRIPTION FACTOR E2F 124 245 IPR015633 GO:0000978|GO:0006357
Pste2g00672 318 Pfam E2F transcription factor CC-MB domain 140 239 IPR032198 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00672 Pste-Chr2 7027227 7030411 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00672 72 252 E2F-DP Transcription Factor Family AT1G47870 51.020 3.98e-58 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00672 2 7027227 7030411 Pste2g00672 2 7027227 7030411 ECH