Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00649 ATGGTTCCATTTCTCTTTATAACCATTGTTCTTCATTATGGGGCTTATGGGGAGGAAAATGTGATCCTGATGAATGAAAAAGAATCACTAGTTTCATTCATGTCAGGCATAGTTTCTGACCCCAAAAAGGTTCTAGAAAGTTGGAAGTCCCCAAGTGTGCATGTTTGCAATTGGTATGGTGTCAGATGCAACAATGCAAGAGACAGGATCATGGAACTTGCTCTTAATGGAAGCTCATTAGGAGGTGTTATTTCCCCTGCTCTTGCTAACCTTTCTTACTTGCAAATTCTTGATATTTCTGATAATTTTTTTGTAGGTCACATTCCTAAAGAACTAGGCTATCTTATCCAGCTTCAACAACTCAGTTTATCTGGGAATTTTCTTCAAGGGAAAATTCCCTCTGAGTTGGGGTCACTTCACAACTTGTACTACCTTAACATGGGAAGTAATCAGCTTGAGGGTGAGATTCCACCCTCACTTTTATGCAATGGATCTTCCACATTGAGGTATATAGACCTCTCTAACAATTCCTTGGGAGGACAATTACCATTGAGCAATGAGTGTATCCTCAAAGAGCTTAGGTTCCTCTTACTTTGGTCTAACAAATTTGTAGGCCATGTTCCTTTGGCTCTTTCAAAATCCACAGAACTAAAATGGTTTGACTTGGAATCAAATAGGTTCAGTGGAGAGTTACCATCTGAAATTTTAAGTAATTGGCCAAAACTACAATTCCTCTACCTATCATATAATGACTTTGTTAGCCATGATGGTAACACCAAACTTGAACCTTTCTTCCATTCCATGGTGAATTTGTCAAACATGCAAGGTCTTGAATTGGCGGGAAACAATCTTGGAGGGAAGCTACCTCATGATATTGGTGATCTTCTTCCTACTAGCCTGTTACAACTTCATCTAGAAGACAATCTCATATATGGTTCTATACCTCCAAACATTGCAAACCTTGTCAATTTGACTCTTTTGAATTTTTCCAGCAACTTGCTGAATGGATCAATACCTCCCACCCTCAGCCGAATGATGAGGCTAGAGAGAATTTATTTCTCAAATAATTCACTATCTGGGGAGATTCCTTCAACCCTTGGTGGCATTCATCATCTGGGGCTTCTTGACTTGTCAAGAAACAAGCTTTCTGGCTCAATACCAGACACTTTTGCCAACCTCACCCAGTTAAGAAGGCTTTTACTTTATGAGAACCAGCTTTCTGGAACAATTCCATCAAGTCTTGGAAAATGTGTCAATTTGGAGATTTTGGACCTTTCCCACAACATGATTACAGGGCTTATTCCTAAGGAAGTTGCAGCCTTGACTAGCTTGAAACTCTACCTGAATTTATCAAGTAATAACTTAGATGGACCTTTACCACTAGAGATCTCCAAAATGAGCATGGTGCTAGCTATGGATCTATCCATGAACAATTTCTCTGGCAGAATCCCACCACAGCTTGAAAGTTGCATAGCATTAGAGTACCTCAACCTTTCTGGTAACTCCTTAGAAGGTCCTCTCCCAGATTCATTAGGCAGATTGCCTTATATTCAAGCAATAGATGTGTCTTCAAATCAATTGACAGGGGTAATACCACAGTCCCTTCAGTTGTCCACTCTCAAGAAACTTAATTTCTCTTTCAACAAATTCTCTGGGAGTGTCTCAAATGAAGGAGCCTTTTCATCCTTGACCATAGACTCTTTCCTAGGAAACCATGATCTTTGTGGCTCGGTGAAAGGCATGCAAAAATGCTACAAGAAACGAAGGTATCATTTGGTTCTCTTACTAATTCCAGTGCTACTATTTGGCAGCCCCCTCCTCTGCATGTTGGGGTACCCCACAATAAAAAAATCAAAAGAAAGAATGCAATTGGCAATAGTTAGAAAAGGTAATTTTGAGGATGAAGATGGGGAAACAAAGGAGCTCAAGTACCCAAGAATTTCATATAGACAACTTATTGAGGCCACTGGAGGCTTTAGTGCTTCAAGCCTAATTGGTTCAGGTCGATTTGGACATGTCTACAAAGGAATTCTCAGAGATAACACCAAAATAGCAGTGAAAGTGTTAGACACAACAACAGCTGGTGAGATTTCAAGGAGCTTTAGAAGGGAGTGCCAAATCCTGAAGAGAACGAGGCACAGAAATTTAATTAGGATCATCACAATTTGCAGCAAAAAGGAGTTTAAGGCTCTTGTTCTTCCCCTCATGCCAAATGGTAGTCTTGAGAGGCACTTATATCCGAGGCATGAGTTGGATATGGTTCAGTTGGTGAGAATCTGCAGTGATGTAGCTGAGGGAGTGGCCTATTTACACCACTATTCTCCTGTTAGAGTAGTGCACTGTGATCTTAAACCGAGCAATATACTACTTGATGATGATTTCACAGCTTTGGTAACTGATTTTGGTATTGCAAGGCTTGTTAAAAGTGACCACTACATGCCCACAAAGTATGGAATGGGAAAACATGCATCAACTCAAGGTGATGTGTATAGTTTTGGTGTACTTCTGCTAGAAATAGTGACTGGTAGACGCCCAACTGATGTCCTTGTCCATGAAGGGTCTTGCTTGCATGAGTGGGTCAAGAGACAATATCCACACAACCTTGGCTTCATTGTTAATCAAGTATTGCAAAGATGCTCTCCCTCTAGCATGCCTAACTATCATCACAAAATTGGTCAAGATGTTATGTTGGAACTCATAGAGTTGGGGCTTCTTTGCACACACCACAACCCTTCAACAAGGCCAAACATGTTGGATGTAGCCCAAGAAATGGGGAGGTTGAAAGACTACCTCTCTTCTCTTTTGATTGAAGATAAATGTAGCGAAAAAGTAAATTACCAAAATTAA 2847 0.4032 MVPFLFITIVLHYGAYGEENVILMNEKESLVSFMSGIVSDPKKVLESWKSPSVHVCNWYGVRCNNARDRIMELALNGSSLGGVISPALANLSYLQILDISDNFFVGHIPKELGYLIQLQQLSLSGNFLQGKIPSELGSLHNLYYLNMGSNQLEGEIPPSLLCNGSSTLRYIDLSNNSLGGQLPLSNECILKELRFLLLWSNKFVGHVPLALSKSTELKWFDLESNRFSGELPSEILSNWPKLQFLYLSYNDFVSHDGNTKLEPFFHSMVNLSNMQGLELAGNNLGGKLPHDIGDLLPTSLLQLHLEDNLIYGSIPPNIANLVNLTLLNFSSNLLNGSIPPTLSRMMRLERIYFSNNSLSGEIPSTLGGIHHLGLLDLSRNKLSGSIPDTFANLTQLRRLLLYENQLSGTIPSSLGKCVNLEILDLSHNMITGLIPKEVAALTSLKLYLNLSSNNLDGPLPLEISKMSMVLAMDLSMNNFSGRIPPQLESCIALEYLNLSGNSLEGPLPDSLGRLPYIQAIDVSSNQLTGVIPQSLQLSTLKKLNFSFNKFSGSVSNEGAFSSLTIDSFLGNHDLCGSVKGMQKCYKKRRYHLVLLLIPVLLFGSPLLCMLGYPTIKKSKERMQLAIVRKGNFEDEDGETKELKYPRISYRQLIEATGGFSASSLIGSGRFGHVYKGILRDNTKIAVKVLDTTTAGEISRSFRRECQILKRTRHRNLIRIITICSKKEFKALVLPLMPNGSLERHLYPRHELDMVQLVRICSDVAEGVAYLHHYSPVRVVHCDLKPSNILLDDDFTALVTDFGIARLVKSDHYMPTKYGMGKHASTQGDVYSFGVLLLEIVTGRRPTDVLVHEGSCLHEWVKRQYPHNLGFIVNQVLQRCSPSSMPNYHHKIGQDVMLELIELGLLCTHHNPSTRPNMLDVAQEMGRLKDYLSSLLIEDKCSEKVNYQN 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00649 948 Gene3D Transferase(Phosphotransferase) domain 1 736 942 - -
Pste2g00649 948 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pste2g00649 948 SMART LRR_typ_2 321 345 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 393 417 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 369 392 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 271 295 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 139 163 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 537 562 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 418 440 IPR003591 -
Pste2g00649 948 SMART LRR_typ_2 115 138 IPR003591 -
Pste2g00649 948 SMART serkin_6 659 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00649 948 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Pste2g00649 948 Pfam Protein kinase domain 661 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00649 948 PANTHER RECEPTOR-LIKE PROTEIN 55 303 925 - -
Pste2g00649 948 SUPERFAMILY L domain-like 28 255 - -
Pste2g00649 948 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Pste2g00649 948 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 736 936 - -
Pste2g00649 948 SUPERFAMILY L domain-like 320 576 - -
Pste2g00649 948 SUPERFAMILY Protein kinase-like (PK-like) 640 922 IPR011009 -
Pste2g00649 948 CDD STKc_IRAK 665 927 - -
Pste2g00649 948 Gene3D Ribonuclease Inhibitor 23 187 IPR032675 -
Pste2g00649 948 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 266 357 - -
Pste2g00649 948 Gene3D Ribonuclease Inhibitor 259 591 IPR032675 -
Pste2g00649 948 ProSiteProfiles Protein kinase domain profile. 659 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00649 948 Gene3D Phosphorylase Kinase; domain 1 622 734 - -
Pste2g00649 948 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524
Pste2g00649 948 Pfam Leucine Rich Repeat 419 437 IPR001611 GO:0005515
Pste2g00649 948 Pfam Leucine Rich Repeat 493 513 IPR001611 GO:0005515
Pste2g00649 948 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 639 735 - -
Pste2g00649 948 Gene3D Ribonuclease Inhibitor 188 258 IPR032675 -
Pste2g00649 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Pste2g00649 948 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 358 588 - -
Pste2g00649 948 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 23 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00649 Pste-Chr2 6600094 6603829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00649 4 924 Receptor kinase-like Gene Family AT5G20480 33.236 6.48e-156 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste2g00649 Pkinase 4.3e-39 CL0016