Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00647 AAAACGTTTAAGAAGTCATAAAGTTATTTCTGCAACAGTAAATTCGTGAATGAAGGCGCAGATACGTGGTTGAAGGAAACATTGGCATTGGCAACTCAATGCATTCATTTTGAGTTGTAGTTGACTTCTATTCCATTACATTTCTCTCTCTGATTTCGCTTCAATCTACCAATCCAGTTTCGTTCTTTCTTTTTTCAAGGTTTTGTATTACATGATTAATCAGTTGAAAGATGTTTGACTGTGGTTACAAGTCACAAAAATTTGTGAGGTATCCAATATAGTTCATTGCACCGGTACGCTTGTAAAGATATGAAGGAGAAGAGAGTTAGTAATATTTATATGTTGGATGACTTGGATTCTAGACTATCATCTTCTTCTGAAGCTGCAGTTAAAACAAGTGGATTTAGTATTGATAAATTAAGCCATGGTGGCCATGGAAGCACTACAACTTCGAGGTCTTTTAAAAGAAGAATTCAAAAGGGATCCGAAGGACTGAAGTCAATTGGCCGATCACTTCGATTTGGGGTATCTAGGGCAGTATTCCCTGAAGATCTTAAAGTTTCAGGAAAGAAGATATTTGACCCTCAAGACAAATTTTTGCTCTTATGGAATAGGCTTTTTGTTATCTCATGCATTATAGCTGTGTCAGTTGATCCTCTGTTTTTTTATCTCCCTGTCATCAATGATTTAGTTCACTGTCTTGGTATAGACCGAAAGTTGGCAATTACAGTTACCACCTTGAGGACATTTATTGATGCTTTCTATCTGATACACATGGCTCTCCAATTTCGTACTGCTTATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAGCTTGTGATAGATCAAGCACAGATAGCCAAACGTTACCTACGGCAGTATTTCATTATTGATTTTCTATCAGTGTTGCCTTTACCGCAGATTGTGGTTTGGCAATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTTGCAACAAAGCGGGCGCTTCTGTTCATTATTTTGCTTCAGTACATTCCTAGATTTTTCCGGATGGTACCATTGACCTCTGAACTTAAAAGAACAGCTGGTGTATTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTATTATTCATGCTTGCTAGTCATCTTTATGATGCATCAAGTTTGACAAGAATTTATTTTGCATCCTTTCCCTTGAACGATTCTTTGCATATAGTTGGGTCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTTTTGCTGGCAAAAGGCTTGTACTGAAAATAGGTGCAATAAAAATTTCTTGTATTGTGGCAACCAATACATGGAAGGTTATAGTGCCTGGCAAAATAAAAGTAAAGATATTCTTATGTCACGTTGCTCTGCGGATGATGATAATCCACCTTTTGACTATGGAATTTTCAAACAAGCCTTGTCATCTCGTATTGTTTCTTCTAAGAAGTTCATCTCCAAGTACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACTCTTGGCCAGGGGCTTGAAACTAGCACCTACACTGGGGAGGTTATGTTTTCGATAGCTCTAGCCATAGCTGGCCTTATTCTCTTTGCTCTTCTGATTGGTAACATGCAGACATATCTTCAGTCTCTTACTATTAGACTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTTCCACAAGATCTTAGAGAGCGTGTGAGACGATATGATCAATACAAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAATTTGGTTCAGAGTTTACCAAAGGATCTTCGAAGAGACATCAAGCGTCACCTTTGTCTGGCTCTAGTGAGAAGGGTTCCCTTATTTGAGAGTATGGACGAGAGATTACTTGATGCCATATGTGAGAGACTGAAGCCATGTTTATTTACAGAAAGTACTTTCATTGTTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATTCGTGGTTGCCTTGAGAGTGTTACTACAGATGGTGGGAGGAGTGGATTCTTTAATCGTGGCTTCTTAAAAGAGGCTGATTTCTGTGGGGAGGAGCTTTTGACCTGGGCACTGGATCCCAAATCTGGCTCTAACCTCCCATCTTCTACTCGAACAGTTAAAGCTTTAACAGAAGTTGAAGCTTTTGCCTTAACTGCTGAAGAGTTAAAGTTTGTCGCCAGCCAGTTTAGGCGCCTGCATAGTAGACAGGTTCAGCACACCTTTCGATTTTACTCACAACAATGGAGGACTTGGGCTGCATGCTTCATTCAAGCAGCATGGCGTCGATATTCCAAGAGGAAAGCTATGGAGCTTTTGCGGAAGGAAGAACCTGAGGAGTCAGAAGGAACTCGGGGCAATGCCAGTGGCAGTTCATACAGGCTTGGTGCCACCATCTTGGCCTCAAGATTTGCTGCAAATGCTCTTCGCGGTGTACATCGCAATAGGGAAGCCAAGAGTGCCAGCGAATTAGTAAAACTACAGAAGCCTCCAGAGCCTGACTTTACTGCTGATGAGGCAGACTAAATTTTCATATGCAAGGCTTCCACATTGGTCAGCCTTGGGCAAACTGATGAAGATTCTCTCTAATGGCATGAGCATTGCTATACACTTGTTCCTTTGCTGTTTGTCATTCAATTCCTTTGTCACTAATGGACCACATCAGTGGCTTCTATTTTCGCTCAATCGTTCTATTGGTGACTTTTTATATGAATCATATCTATACACTTCTTTCTTACCAACAATTATATGAATCATATCGATGTACATATGAATCATATTAGTGATGACTTCTTTCAATGATTATTTTTAACGTATAAATTATAAAATAACTCAAC 2858 0.3999 MKEKRVSNIYMLDDLDSRLSSSSEAAVKTSGFSIDKLSHGGHGSTTTSRSFKRRIQKGSEGLKSIGRSLRFGVSRAVFPEDLKVSGKKIFDPQDKFLLLWNRLFVISCIIAVSVDPLFFYLPVINDLVHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDQAQIAKRYLRQYFIIDFLSVLPLPQIVVWQFLQRSKGSDVLATKRALLFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHLYDASSLTRIYFASFPLNDSLHIVGSFWYLLAVERNDFCWQKACTENRCNKNFLYCGNQYMEGYSAWQNKSKDILMSRCSADDDNPPFDYGIFKQALSSRIVSSKKFISKYCYCLWWGLQNLSTLGQGLETSTYTGEVMFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTFIVREGDPVDEMLFIIRGCLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELLRKEEPEESEGTRGNASGSSYRLGATILASRFAANALRGVHRNREAKSASELVKLQKPPEPDFTADEAD 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00647 745 Gene3D - 103 443 - -
Pste2g00647 745 Gene3D Jelly Rolls 516 636 IPR014710 -
Pste2g00647 745 Pfam Ion transport protein 99 277 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g00647 745 Pfam Ion transport protein 297 444 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g00647 745 Gene3D Helix hairpin bin 446 509 - -
Pste2g00647 745 ProSiteProfiles cAMP/cGMP binding motif profile. 518 648 IPR000595 -
Pste2g00647 745 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 298 739 - -
Pste2g00647 745 Pfam Cyclic nucleotide-binding domain 541 629 IPR000595 -
Pste2g00647 745 SUPERFAMILY cAMP-binding domain-like 447 638 IPR018490 -
Pste2g00647 745 SUPERFAMILY Voltage-gated potassium channels 91 440 - -
Pste2g00647 745 ProSiteProfiles IQ motif profile. 654 683 IPR000048 GO:0005515
Pste2g00647 745 CDD CAP_ED 518 649 IPR000595 -
Pste2g00647 745 FunFam Cyclic nucleotide-gated ion channel 1 445 509 - -
Pste2g00647 745 MobiDBLite consensus disorder prediction 719 745 - -
Pste2g00647 745 SMART cnmp_10 518 649 IPR000595 -
Pste2g00647 745 FunFam Cyclic nucleotide-gated ion channel 1 516 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00647 Pste-Chr2 6548745 6564098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00647 18 742 Ion Channels AT5G57940 76.511 0.0 1121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00647 2 6548745 6564098 Pste2g00647 2 6548745 6564098 ECH