Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00636 ATGGGTTTGGGAGTGTTTGGTTCTCTTCTAGTGCTGACACTCTTGTTCAAGCACTTGGCATCCCAACAACCAAACACTGATGATTTTTTTGTGTCTGAGTTCTTGAAGAAGATGAATTTAGCATCCTCCAAGGTCTACAACTTTTCTGCTTCTGTTTGCTCATGGAAAGGGGTTTCATGTGATGCCAAAAGAGAACATGTTGTTGGTTTAGCCTTTTCTGGCATGAACCTCTCTGGTCCTATTCCAGATACCACCATAGGAAAGCTTAGCAAGCTTCAATCTTTGGACCTTAGCCACAACAAAATTACAGACTTGCCTTCCGATTTCTGGAGTTTTAGCTTGCTCAAGAGCCTTAACCTCTCCTTCAATCAGATTTATGGTTCATTGACTAACAACATTGGAAACTTTGGTTTGTTACAAGTGTTTGACTTGTCGAGCAACAATTTCTCTGGGGAAATTCCTGAAGCTATTAGTTCCCTCATGAGTCTGAAAGTTCTCAAACTTGACCACAACAGGTTTGAGCAAAGAATACCTTCTGGGATTCTCAAGTGCCACTCTCTAGTTTCCATTGATCTTTCTTCAAATCAGTTAAGTGGGACAGTTCCAGATGGTTTTGGTGCTTCTTTTCCTAATCTCATTACATTGAACCTTGCTGGGAATAATATTAATGGCAGTGATTCAGATATTTCTGGTTTTAAGTCTCTTGTGATTCTCAACATATCAGGCAATTCCTTTCATGGTTCTGTGATGAGTTTGTTTCAGGGAAGACTTGAGGTCATGGACCTTAGCAGAAACCAATTTGAAGGTCACATTTCTCAGGTACATTCCCTCTCTAGATACAACTGGTCTCATTTAGTTTATCTGGATTTGTCTGAAAATCATCTAGATGGGGAGATTTTCCAAAATTTGAATGAATTCAACAATCTAAAGCACCTTAATCTTGGTCACAATAGATTCTCCAGCCAGAAATTCCCCAAGATTGAAATGCTCTCAGTATTGGAATATCTGAACTTGTCCAAAACTAGTCTGATTGGTTACATTCCTCCTGAAATCTCTCAACTTAGTAATTTGAGTGCACTTGATGTTTCAATGAATCATCTCATAGGAAAAATCCCTTCACTAAACAATAAAAACCTCAAAGTTCTTGACCTTTCAAACAACAATTTGAGTGGAGATGTTCCTTCATCAGTCATAGAGAAACTTCCTTTAATGGAGAAATTCAACTTCTCTTATAATAACTTAACCTTCTGTGCTTTGGAAATCAAATCAGCTATCCTCCAAACAGCATTCTATGGATCAGTGAACAGTTGTCCAATTGCTGCAAACCCAAGTCTTCTGAAAAGAGCCACTCAAAATAAGGGAATGAAGCTAGCTCTGGCATTGACCTTCTCAATGATCTTCTTGATTGCTGGACTCTTGTTTCTAGCATTCGGTTGCCTTAAGAAAACAAAACCATGGACTGTTAAGCAAACTTCATACAAAGAAGAACACAATATGTCAGGTCCATTCTCATTCCACACTGATTCAACCACTTGGGTGGCTGATGTTAAGCAAGCAACATCTGTCCCAGTAGTAATCTTTGACAAGCCACTATTAAACATAACCTTTGCTGACCTCTTGGCTGCAACTTCAAATTTTGATAGGGGTACCCTTTTGGCTGAAGGAAAATTTGGGCCAGTTTATAGAGGCTTTCTACCTGGTGGTATTCATGTAGCAGTTAAAGTTCTGGTGGTTGGATCTACTCTTACAGATAAAGAAGCTGCAAGGGAGCTAGAGTATCTTGGTAGAATCAAGCACCCCAATCTTGTTCCTCTAACTGGATATTGTGTAGCAGGGGATCAAAGGATTGCTATATATGACTACATGGAAAATGGAAACTTGCAAAATTTGCTTTATGACTTGCCACTTGGTGTACTACAAAGAACAGATGATTGGAGCACAGATACATGGGAAGAAGAAGATGACAGCAATGGAATTCAAAATGCTGGATCAGAAGGAGTTCTCACAACTTGGAGATTTCGCCATAAAATCGCCCTTGGCACAGCTCGAGCATTGGCCTTTCTGCATCATGGATGCTCCCCACCAATCATTCACAGAGATGTTAAAGCTAGCAGTGTTTATTTGGACTACAACTTGGAGCCTAGACTATCAGATTTTGGGCTGGCCAAGATATTTGGGAGCGGTTTGGATGAGGAGATTGCTCTTTGTTCGCCTGGCTATGTTCCACCGGAGTTTTCTGAACCAAATTTTGACACCTCAACACCAAAATCTGATGTGTACTGTTTCGGGGTTGTGCTCTTTGAGCTACTAACTGGGAAGAAGCCTGTTGGAGATGATTATTCTGATGAGAAAGAAGCAACTTTGGTTAGTTGGATCAGAGGACTAGTGAGAGTAAACAAAGCTTCAAGTGCTATTGATCCAAAAATTCATGATACTAGATCCGAAAAGCAAATGGAAGAGGCACTTAAGATTGGCTATCTTTGCACTGCTGATATTCCTTCCAAGCGACCAAGCATGCAGCAGATAGTTGGACTTCTTAAAGATATTGAACCTTCTACTAATATAGCATAA 2571 0.3998 MGLGVFGSLLVLTLLFKHLASQQPNTDDFFVSEFLKKMNLASSKVYNFSASVCSWKGVSCDAKREHVVGLAFSGMNLSGPIPDTTIGKLSKLQSLDLSHNKITDLPSDFWSFSLLKSLNLSFNQIYGSLTNNIGNFGLLQVFDLSSNNFSGEIPEAISSLMSLKVLKLDHNRFEQRIPSGILKCHSLVSIDLSSNQLSGTVPDGFGASFPNLITLNLAGNNINGSDSDISGFKSLVILNISGNSFHGSVMSLFQGRLEVMDLSRNQFEGHISQVHSLSRYNWSHLVYLDLSENHLDGEIFQNLNEFNNLKHLNLGHNRFSSQKFPKIEMLSVLEYLNLSKTSLIGYIPPEISQLSNLSALDVSMNHLIGKIPSLNNKNLKVLDLSNNNLSGDVPSSVIEKLPLMEKFNFSYNNLTFCALEIKSAILQTAFYGSVNSCPIAANPSLLKRATQNKGMKLALALTFSMIFLIAGLLFLAFGCLKKTKPWTVKQTSYKEEHNMSGPFSFHTDSTTWVADVKQATSVPVVIFDKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDKEAARELEYLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVLQRTDDWSTDTWEEEDDSNGIQNAGSEGVLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSGLDEEIALCSPGYVPPEFSEPNFDTSTPKSDVYCFGVVLFELLTGKKPVGDDYSDEKEATLVSWIRGLVRVNKASSAIDPKIHDTRSEKQMEEALKIGYLCTADIPSKRPSMQQIVGLLKDIEPSTNIA 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00636 856 SMART LRR_typ_2 330 354 IPR003591 -
Pste2g00636 856 SMART LRR_typ_2 160 184 IPR003591 -
Pste2g00636 856 SMART LRR_typ_2 89 111 IPR003591 -
Pste2g00636 856 SMART LRR_typ_2 112 136 IPR003591 -
Pste2g00636 856 SMART LRR_typ_2 209 232 IPR003591 -
Pste2g00636 856 SMART LRR_typ_2 377 400 IPR003591 -
Pste2g00636 856 FunFam Nuclear pore complex protein NUP107 29 179 - -
Pste2g00636 856 Gene3D Ribonuclease Inhibitor 178 277 IPR032675 -
Pste2g00636 856 Gene3D Ribonuclease Inhibitor 278 375 IPR032675 -
Pste2g00636 856 Gene3D Ribonuclease Inhibitor 29 177 IPR032675 -
Pste2g00636 856 ProSiteProfiles Leucine-rich repeat profile. 378 400 IPR001611 GO:0005515
Pste2g00636 856 SMART LRR_sd22_2 282 305 - -
Pste2g00636 856 SMART LRR_sd22_2 89 107 - -
Pste2g00636 856 SMART LRR_sd22_2 376 403 - -
Pste2g00636 856 SMART LRR_sd22_2 306 332 - -
Pste2g00636 856 FunFam Putative LRR receptor-like serine/threonine-protein kinase 507 621 - -
Pste2g00636 856 PRINTS Leucine-rich repeat signature 92 105 - -
Pste2g00636 856 PRINTS Leucine-rich repeat signature 354 367 - -
Pste2g00636 856 Gene3D Transferase(Phosphotransferase) domain 1 654 855 - -
Pste2g00636 856 SUPERFAMILY L domain-like 41 418 - -
Pste2g00636 856 FunFam Calmodulin-binding receptor kinase CaMRLK 255 373 - -
Pste2g00636 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 281 849 - -
Pste2g00636 856 Pfam Leucine Rich Repeat 378 396 IPR001611 GO:0005515
Pste2g00636 856 SUPERFAMILY Protein kinase-like (PK-like) 531 848 IPR011009 -
Pste2g00636 856 Gene3D Ribonuclease Inhibitor 376 452 IPR032675 -
Pste2g00636 856 Pfam Protein kinase domain 550 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00636 856 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Pste2g00636 856 ProSiteProfiles Protein kinase domain profile. 546 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00636 856 Gene3D Phosphorylase Kinase; domain 1 506 621 - -
Pste2g00636 856 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Pste2g00636 856 Pfam Leucine rich repeat 81 125 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00636 Pste-Chr2 6340105 6342675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00636 77 849 Receptor kinase-like Gene Family AT5G07280 32.170 1.22e-110 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pste2g00636 Pkinase 1.5e-32 CL0016