Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00634 TTTTCAATTGCTGTTTTGGCGCGCAACACGAATGGAGCGAAGACAGTTACAAACTGCACGTGGAAAACGTGATCGGTCAGTTCCGAATGACGGTGCCGCCAGTTTCGGTTTCAGTGTGCAATTTCACAAACCGAGAGGCCAAAACGACGACGTTGAACCCGCGCGACGACATCGCGCTCGCGGAATACCCATGCCACGGCTTGGGATGCCCCGTGCTAAGGCTCGACGACATGTGGCGCCTGCTACGGTCGTGCGAGGCGCGCCTCTCGCGCCGCCGCGACGTCGTTTTGATGCACTGTGAGCGCGGTGCGTGGCCGGTGCTCGCCTTCGCGGTGGCGGCGCTGCTGGTGTTTCGGAACCAGTGCGTGGCGGAGAAGCAGGCTTTGGATTTGGTTTACGAGCAGGCGCCACGTCAGCTTCTGCACTCGCTGATGGCGGTGAATCAGATTCCGTCTCAGTTGAGGTACTTGCGTTACGTTGCTACGTGGAACGAGAAATTGGATTTGGATTTGGATTTGGTTCCGGTGAACAGTGTGGTGAGGTTGGATTCGATTGTGCTGAGGTTTATGCCGACATTTGGTGGAGAATGTGGTGTTCGACCGGTGTTTAGGGTTTCTGGAGAGGATCCTTTCGGTGAGGATGGGAATACGAAATTGTTGTACCAGACAAGGGGAGAAAATGCACAGGATTACCAACAGGAAGATTTTAATACAATTAAAATCAATGTAAATTGCCTTGTCAAAGGTGATGTCCTGATTGAGAGCATTAATGTAAATGGTGAGTTGAACAGTGAACAGATAATGTTCCGAGTCATGTTCAATGTAACTTATGTTGGATCCAATATGTTACTGCTTAACCGGGACAAAATTGATGTTTTATGGTATGCTAAAGATCACTTCCCAAAGGATTTCAGGGCAGAGATTCTTTTCTCAGAAATGGATGCTTCTACAGCTGCTAGAAAGAATGGTACCTCATGGTTTGAGGAGAATGAGGGACTGCCAGTTGAAGCATTTCCCAAAGTTCAAGAAATCTTTAGCCATGCAGACTGGATGAATCCCATAAAATATCCTGCACTAAATGTCCTCCAACAGCAGTGTGCTTCACCTCACAAAGCCAAACATGAAAAGTTGAATCCATGTTCAAATCAGTATGCAGAGAGTGGCAATCTTTTGCATAAAAAAGGTCCACAAATGCCTCAGGAGAGGAAGAATGAACCAAATTGCTTATTGTCTTCAAATATGCAAAACCAGTTTGTGAAATCACCTGATAACAATGTGAGTAGAAAAGAGGATAAGACCATCAAAGCTGATGGTACTCCATCAAAGCAAAGTAAGGTTGATAGTATCAGTCACGAAATGCCTAGTCATTTAGAAAATAGTACAAATTTGTCAACAAAAAAACTACATACATCTGATTTTGCCTTATCCAATTCTGTGGAAACCTCTTCTAGGGGTACCATTTCACCACAAACACCTCCAACTTCGCCTCCCATGATTAACAATAGAAGTCAATCATGGAGTTTTAGCTCTACAATAGGAACTCCTATCTCAAGTACTTTTCAGAACAAGTCACCAGATGATTCTTCTTCCTGTCCTCCAAATCCTGCAATTAGTTCAAATCAACCACCTTCTCCAAAGAAGATTTTACCTGTTAACACAGAACTTGACTCTTCCCCTTCACAATCTCAATCACCCCTATCTCCTCCCACTCCTCCTTTGAAGCAAGACCTCCAAAGATCCCCACCAACTCCTCCCACTCCTCCACTAAAGAATGAACCAATAAGAGCAAGACCTCTAGCATCCCCACCAACTCCTCCCACTCCTCCACGAAAGGAACATGAACCAATTAGAGTTAGACCTCCTCCACCCCCACCAACTCCTCCTCCAAAGGATGAAAGGCACATCATATGTCAAGCCCCTCCTCCTCCACCCCCACCTCCTTGTCCATTTGCAAGAGCTGCAAGTTCAACTATAGAACCACCACCACCACCACCTCCTCCAGCCTTAATAAATTCCTCTGATTACTCTAATTCTTCGTCTCATAAGTCTCAAACAGTTCCTGCTGCTCCACCACCTCCAACTTCCTCTGCTAATGGAGGTATACAACCAGGAATTGGTTTTCCCAGGTCACTTTCTGTGGGTGCTCATGGACGTAATGTGTCAAGTGCAAATATTGGATCAAATGGACGAATTCTATCACATTCAAATACAATGAATCACACCAAAAAATTGAAGCCATTGCATTGGTTGAAACTGCCTAGAGCTGTGCATGGAAGTTTGTGGGAGGAGACACAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAAATTGATATGTCCGAGCTTGAAAGTCTCTTCTCGGTTGCAGCTCCAAGTTCAGGCCCTTCCAAAAAATCAAATGTGCAAAGCTCTGTTGCACCAAAATCTGATAAAGTGCAACTGATTGATCATACACGAGCATATAATTGCGAAATTCTTCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGATCAGTGTTAGCTCTAGAAGAATCTGCATTAGACACTGATCAAGTTGAGAATCTGATCAAATTTTGTCCTACAGAAGAGGAGATAGAAATACTCAAGGAATATACTGGAGAAAGGGAGAAGCTTGGGAGATGTGAACAGTTCTTCTTGGAGTTGATGAAAGTTCCTCGGGTAGAATCCAAGCTCAGAGTCTTTTCATTCAAGATTCAGTTTCACTCTCAGTTAACGCTGCTTCAGAAGAGGCATGATAATCTTACTATATACTTAAATTCTCTGTCCAATTTTATCCGTCTCTCTGAGCCTTCCTTTATGGCGAATAAGAATAAGTTCTCCTTTGGGTTCACTGCCATTGAATACCTGGGCAATGTAATTTCCACCCAAGAAGTGCAAATGGACACCCTATCAGGGTTTGGGCAATGGTCCAATTCCCACATCAATCAAGCACATTCGTGGATTTCTGGGTCGCCGGTAGAGAAAGCTACTTGGGAGTCTACCATGTCTATTAGATCCAAATTTCCTGAGTTCAGCCTTGACACAAGGCTAACATTGGATAGTCTTCTTAAACTGACTGAGACACGTGCACAGAAGAAGAACATAACTCTCATGCATTACCTTTGTAAGGTTCTTGCAGATAAATTACCAGAAGTTTTAAATTTCTCCAAGGATCTTGCTAACCTTGAACCAGCATCAAAGATTCAATTGAAGTTTCTTGAAGAGGAAATGAGGGCTTTAAGCAACGGACTCAAGAAAGTTGAACACGAACGGTCCACCTCTGAAAACGATGGCCCTATATCAGAAACTTTCTGCATGAAGTTGAAAGAGTATCTCTGTTCTGCAAAGGCTGAAGTCTCTTCAGTGTCTTCACTAAATTCTGCCGTGGGCAAGAACGTAGATGCTTTGATTATTTATTTTGGTGAAAATCCATCTCGCTGCCCTTTTGAGCAAGTTATCACAACTTTGCTCAACTTTACCGGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCAAGAAATGAAGAAAACAGAAGAT 3551 0.4393 MTVPPVSVSVCNFTNREAKTTTLNPRDDIALAEYPCHGLGCPVLRLDDMWRLLRSCEARLSRRRDVVLMHCERGAWPVLAFAVAALLVFRNQCVAEKQALDLVYEQAPRQLLHSLMAVNQIPSQLRYLRYVATWNEKLDLDLDLVPVNSVVRLDSIVLRFMPTFGGECGVRPVFRVSGEDPFGEDGNTKLLYQTRGENAQDYQQEDFNTIKINVNCLVKGDVLIESINVNGELNSEQIMFRVMFNVTYVGSNMLLLNRDKIDVLWYAKDHFPKDFRAEILFSEMDASTAARKNGTSWFEENEGLPVEAFPKVQEIFSHADWMNPIKYPALNVLQQQCASPHKAKHEKLNPCSNQYAESGNLLHKKGPQMPQERKNEPNCLLSSNMQNQFVKSPDNNVSRKEDKTIKADGTPSKQSKVDSISHEMPSHLENSTNLSTKKLHTSDFALSNSVETSSRGTISPQTPPTSPPMINNRSQSWSFSSTIGTPISSTFQNKSPDDSSSCPPNPAISSNQPPSPKKILPVNTELDSSPSQSQSPLSPPTPPLKQDLQRSPPTPPTPPLKNEPIRARPLASPPTPPTPPRKEHEPIRVRPPPPPPTPPPKDERHIICQAPPPPPPPPCPFARAASSTIEPPPPPPPPALINSSDYSNSSSHKSQTVPAAPPPPTSSANGGIQPGIGFPRSLSVGAHGRNVSSANIGSNGRILSHSNTMNHTKKLKPLHWLKLPRAVHGSLWEETQKSGEASKAPEIDMSELESLFSVAAPSSGPSKKSNVQSSVAPKSDKVQLIDHTRAYNCEILLSKVKVPLHDLMRSVLALEESALDTDQVENLIKFCPTEEEIEILKEYTGEREKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQLTLLQKRHDNLTIYLNSLSNFIRLSEPSFMANKNKFSFGFTAIEYLGNVISTQEVQMDTLSGFGQWSNSHINQAHSWISGSPVEKATWESTMSIRSKFPEFSLDTRLTLDSLLKLTETRAQKKNITLMHYLCKVLADKLPEVLNFSKDLANLEPASKIQLKFLEEEMRALSNGLKKVEHERSTSENDGPISETFCMKLKEYLCSAKAEVSSVSSLNSAVGKNVDALIIYFGENPSRCPFEQVITTLLNFTGMFNKAHEENCKQLEQEMKKTED 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00634 1155 SMART it6_source 705 1155 IPR015425 -
Pste2g00634 1155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 187 284 IPR035892 -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 410 460 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 468 534 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 535 580 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 395 409 - -
Pste2g00634 1155 PANTHER FORMIN-J 7 1154 - -
Pste2g00634 1155 ProSiteProfiles Formin homology-2 (FH2) domain profile. 705 1155 IPR015425 -
Pste2g00634 1155 Gene3D Formin, FH2 domain 701 942 IPR042201 -
Pste2g00634 1155 Gene3D - 145 287 - -
Pste2g00634 1155 SMART PTEN_C2_2 146 283 IPR014020 -
Pste2g00634 1155 SUPERFAMILY Formin homology 2 domain (FH2 domain) 990 1154 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 759 778 - -
Pste2g00634 1155 SUPERFAMILY Formin homology 2 domain (FH2 domain) 718 902 - -
Pste2g00634 1155 Pfam Formin Homology 2 Domain 707 894 IPR015425 -
Pste2g00634 1155 Pfam Formin Homology 2 Domain 990 1135 IPR015425 -
Pste2g00634 1155 Coils Coil 1042 1062 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 375 394 - -
Pste2g00634 1155 Gene3D Formin, FH2 domain 973 1155 IPR042201 -
Pste2g00634 1155 ProSiteProfiles C2 tensin-type domain profile. 148 284 IPR014020 -
Pste2g00634 1155 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 24 131 IPR029021 -
Pste2g00634 1155 PRINTS Proline rich extensin signature 574 599 - -
Pste2g00634 1155 PRINTS Proline rich extensin signature 460 476 - -
Pste2g00634 1155 PRINTS Proline rich extensin signature 509 530 - -
Pste2g00634 1155 PRINTS Proline rich extensin signature 552 569 - -
Pste2g00634 1155 PRINTS Proline rich extensin signature 606 618 - -
Pste2g00634 1155 Coils Coil 1136 1155 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 351 684 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 590 641 - -
Pste2g00634 1155 MobiDBLite consensus disorder prediction 642 656 - -
Pste2g00634 1155 Gene3D Protein tyrosine phosphatase superfamily 4 144 IPR029021 -
Pste2g00634 1155 Pfam C2 domain of PTEN tumour-suppressor protein 149 283 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00634 Pste-Chr2 6284492 6301038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00634 4 323 Protein tyrosine phosphatase (PTP) family AT5G58160 43.293 1.61e-80 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00634 2 6284492 6301038 Pste2g00634 2 6284492 6301038 ECH