Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00628 ATGACAGAGAATCAGAAGAGCAATGAAGCGATTAACTCCAACTCCACCTTGCTGCATGGAAAATACGAAGTGGGAAGGTTACTCGGCCATGGAACATTCGCGAAGGTGTACCACGCGCGCAACCTGAAAACGGGAAAGAACGTGGCCATGAAAGTGGTGGGGAAGGAGAAAGTGATGAAAGTTGGAATGATGGAGCAGATCAAAAGAGAGATCTCAGCCATGAACATGGTGAAGCACCCGAACATAGTGCAGCTGCACGAAGTCATGGCGAGCAAATCCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAACTCTTCAACAAGATCGCCCGCGGACGTCTCCGAGAAGACACCGCCAGGCTCTACTTCCAGCAGCTTATATCCGCGGTGGACTTCTGCCACAGCCGCGGTGTATTCCACCGCGACTTAAAACCAGAAAATTTGCTCTTGGATGAAACCGGTGACTTAAAAGTGACCGACTTTGGCCTCAGCACATTCTCTGAACACCTCCGACATGACGGCATGTTCCACACTACATGTGGTACTCCAGCTTACGTCGCCCCGGAGGTGGTCGGTAAAAAGGGTTACGACGGGGCTAAAGCTGATATTTGGTCCTGCGGCGTAATCCTTTATGTTCTTCTTGCAGGCTTTTTACCCTTCCAGGAGGATAACTTAATTTCTCTCTATAAGAAAATTTACCGCGGTGATTTCAAGTGTCCACCGTGGTTCTCTTCCGATGCAAGAAGACTCGTGACCAAACTTCTTGACCCGAATCCGAATACCCGGATTTCAATCTCCAAGATCATGGACTCCACATGGTTCAAAAAGCCAATTCCGAAGAACTTACAGAGAAAGAAAGATGAATTGTTGGATATAGAAGAAAAGATCAAGCAACAAGAGATTGAACAATGTTCTACCATGAATGCTTTTCATATAATTTCACTCTCGGAGGGTTTTGATTTGTCGCCGTTGTTCGAAGAGAAGAAGAGAGAAGAGAAAGAGATTCGGTTTGCAACCACGCGATCTGCGAGCAGCGTGATTTCGAAGCTAGAGGAAGTGGCTAAGGCGGTGAAGTTCGACGTGAAGAAGAGCGAGAGCAAAGTGAGGCTCCAGGGGCAGGAGCGAGGGCGAAAAGGTAAACTAGCAATTGCTGCGGATTTCTACGCCGTTACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAAGACAACGGTGACACCCTAGAGTACAACCAATTCTGCAGCAAAGAGCTTCGGCCCGCGCTCAAAGACATTGTTTGGAGAACAACAACTTCTTCTGAGAACCCTAGTACCCTGCTTGAACCCAACACTCTCGCTGTCGTTTAG 1350 0.4867 MTENQKSNEAINSNSTLLHGKYEVGRLLGHGTFAKVYHARNLKTGKNVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREDTARLYFQQLISAVDFCHSRGVFHRDLKPENLLLDETGDLKVTDFGLSTFSEHLRHDGMFHTTCGTPAYVAPEVVGKKGYDGAKADIWSCGVILYVLLAGFLPFQEDNLISLYKKIYRGDFKCPPWFSSDARRLVTKLLDPNPNTRISISKIMDSTWFKKPIPKNLQRKKDELLDIEEKIKQQEIEQCSTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRSASSVISKLEEVAKAVKFDVKKSESKVRLQGQERGRKGKLAIAADFYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRTTTSSENPSTLLEPNTLAVV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00628 449 Gene3D Kinase associated domain 1, KA1 304 429 - -
Pste2g00628 449 FunFam Non-specific serine/threonine protein kinase 304 428 - -
Pste2g00628 449 Pfam NAF domain 307 365 IPR004041 GO:0007165
Pste2g00628 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 425 - -
Pste2g00628 449 Gene3D Phosphorylase Kinase; domain 1 19 103 - -
Pste2g00628 449 FunFam Non-specific serine/threonine protein kinase 12 305 - -
Pste2g00628 449 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00628 449 Coils Coil 284 304 - -
Pste2g00628 449 Gene3D Transferase(Phosphotransferase) domain 1 104 280 - -
Pste2g00628 449 SUPERFAMILY Protein kinase-like (PK-like) 19 286 IPR011009 -
Pste2g00628 449 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00628 449 CDD STKc_SnRK3 21 275 - -
Pste2g00628 449 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Pste2g00628 449 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Pste2g00628 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pste2g00628 449 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Pste2g00628 449 CDD CIPK_C 310 424 - -
Pste2g00628 449 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00628 Pste-Chr2 6194016 6195365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00628 12 433 CBL-interacting serine-threonine protein kinases AT4G30960 72.685 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste2g00628 Pkinase 1.8e-73 CL0016