Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00607 GTACGATACCGAAGTTTTCGTGTTGTTCTTGGGGTAGAACAAGAAGCAGGCACAGGTTATAAGTGAGAGAGGGGGGATGGGTATCATGATAAAGGGAGAAATAGAGAAGGTTAATGCGAAGGGACTGAATTACAGTGACTTTGTGGAGAGATATATGGAGAAGAACCAGCCTGTGGTACTCACTGGACTAATGGACCCTCATCATTGGAGAGCTTCCACTGACTGGGTCACACATCGTGCCCAACCCAACTTTCAATTTTTCTCAACTCATTTCGGGGCTTCCAAAGTTCAGGTTGCTGATTGTGACAACAGGGAATTCACTGATCAGAAAAGAGAAGAGATGTTGGTCTCAGATTTTATAGCACGGTGCCTTCAACTTGAGGAAGCTTCTGCTGTTCAATGTAGTAATAAAAATAGTGCAAGTAATGGGGCTTCTGTATCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCTGAATATGTAGCATACGTCACTCCCATGTTCTTTTGTGATGATTGGCTCAACCTGTATCTTGACAACTTCAGAATGCATATTGATTCTGACACACAACAACCAAATGAGGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGTCAAAGGTGATCCTGGACTCCTCTTCATGCTGATGTTTTCATGTCATATAGCTGGTCAGCAAATGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTTTCAAACTCAAAGTTTCCTGATTTTAGCAAGGCTATCTGGTTAGAATGCACACAAGATGCAGGTGAAATTATTTTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCCATAAACCACAATTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAGAGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTCTGCCAGCGCAACCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACTTTCATGGTATACTTCACCTTGGCCAACTTGGTTTTGCTTCGTTATATAAATAGAAGATATGGAAGTACAACGGGGAGTTCGTCAACAATAGCTCAGCATTTATCAATGAATCTTGGGAGTTTAAGGAAGATTGCATCAGAGATGAAACACATGCGAGCTCTAGAAGGAAATCACAATTGTGTTGTGAATATGATGAAAGCACTCAAAGATCCTAGATTTTCCAAATTATGCATGCACGTAGCAAGAACATATATAATAATACACGAGCAATCTGACTTGTCCTCTGATTTTGAGAGTCCTTCAATGAGTGATCTGGTGAACCTTAATGATGTAAAATCATATCCATGTCAGATCTACGCACCTGAAGATCTAACTAAATTTATAGACAATGGTGTTGCAGAACTGGGTAACTATTTTATTGAGCCATCTATACTCCATGGTGCTTGAATGTCCTTTTTAAAATTCATGTCTGACAAATGATTATTGCACTTGAAGTTGGGACCACTTACTGCAGTCATGCAATTTTCAACTCTTTCCTTTCTTATGTGAGACAAGAATGTTATCACCCAACTTGCAATAGTTTAAGTAAGCTTTACTGATCACTCCTATTCCTACATAGATATCTCTCATTTTATGCTCAATTGAGTCGCCCTTTCGTGTTCATGTGGTTTCATAGTTTTGCTTGTCCCTTGCTTTCTAGTTTTCTATACTTGCCCTTTTGGCTGGTTAGAAATCAATGCCTCTTTGATTAAAAGTGTCCAATTTTCTGTACATTACGATTGTTGATTCTTCATTTTCATGGTACCTACAAGTTTTGTAGATGTATTTGGTTGA 1876 0.3843 MGIMIKGEIEKVNAKGLNYSDFVERYMEKNQPVVLTGLMDPHHWRASTDWVTHRAQPNFQFFSTHFGASKVQVADCDNREFTDQKREEMLVSDFIARCLQLEEASAVQCSNKNSASNGASVSVPYLKDWHFVKEYPEYVAYVTPMFFCDDWLNLYLDNFRMHIDSDTQQPNEEICCSDYRFVYMGVKGDPGLLFMLMFSCHIAGQQMNMKNCVYNIFDEVSNSKFPDFSKAIWLECTQDAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAREYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFMVYFTLANLVLLRYINRRYGSTTGSSSTIAQHLSMNLGSLRKIASEMKHMRALEGNHNCVVNMMKALKDPRFSKLCMHVARTYIIIHEQSDLSSDFESPSMSDLVNLNDVKSYPCQIYAPEDLTKFIDNGVAELGNYFIEPSILHGA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00607 470 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 188 - -
Pste2g00607 470 Pfam Cupin-like domain 217 267 IPR041667 -
Pste2g00607 470 Gene3D Cupin 195 269 - -
Pste2g00607 470 Gene3D Cupin 3 190 - -
Pste2g00607 470 SUPERFAMILY Clavaminate synthase-like 19 296 - -
Pste2g00607 470 SMART cupin_9 146 284 IPR003347 -
Pste2g00607 470 ProSiteProfiles JmjC domain profile. 121 284 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00607 Pste-Chr2 5874781 5879072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00607 234 276 Glycosyltransferase AT1G78280 46.512 1.66e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste2g00607 Cupin_8 2.6e-10 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00607 2 5874781 5879072 Pste2g00607 2 5874781 5879072 ECH