Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00598 ATGGCCACCGTCACTACTCAAGCCTCCGCCGCCATCTTCCGACCATGTGCTTCAAAATCTAGGTTTTTGACCGGCTCTTCCGGTAAACTCAACCGGGAAGTGACTATGAGGCCAATGGGGTGCCCTGCTTCTGCTTCTTTCAAGGTTGAAGCTAAGAAGGGAGAATGTCTCCCTGGTGACAATGGATTTGACCCTTTGGGGCTTGCTGAGGACCCAGAGAACTTGAGGTGGTACGTGCAAGCAGAGCTTGTGAATGGACGTTGGGCCATGTTGGGTGTTGCAGGAATGTTGCTTCCTGAGGTTTTCACCAAAATTGGAATCATCAATGCCCCTCAGTGGTATGATGCAGGGAAATCAGAGTACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATCTTGTTCCATTATGTGGAGATCAGAAGATGGCAAGACATTAAGAACCCTGGTTGTGTCAACCAAGACCCCATCTTCAAGCAATACAGCTTGCCCCCACATGAGTGTGGATACCCTGGTAGTGTGTTTAACCCCTTGAACTTTGCACCTACTTTGGAGGCCAAGGAGAAAGAACTTGCCAATGGGAGATTGGCTATGTTGGCATTCTTGGGATTCATAGTTCAACACAATGTTACAGGCAAAGGACCATTTGAGAACCTCTTGCAGCACCTTTCAGACCCATGGCACAACACCATCATCAATACAATTCGTGGCTACTAAGTTTGTATCCAATGACATGATGAGCCTGTGTCCTTCTCGTGTAATCCTGATGAATGGATGAATTTTGAGAGAGATTTGGCTATGATTGTTATGATCCGTCTATTTTCATGTACAGAGGAACTAAGATGGTTTATATTGTTGTTTAGATTCAAGTCCATCGATCAGCAATTAAGCTTGACACTTTAAAAAAATTCAAAATTCTAATACAAGATTTTCAAAGTATGTTTTTTCCAACTAAGTCTAATTTCAAAACTCTACCACTACCACCAATATATAAACTTAGTCAAAATAGCTGAAACATTTATGTGTGGACAAACTGTACTTGTATAAGTCTCCATTGACCTCATATGGAGAAGAAACGTGAAGGGAACAATTCTAATTTGATGATGAGATATTATTATTTATATATTTATAATTATTTACAAAAGG 1149 0.4151 MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVTMRPMGCPASASFKVEAKKGECLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSDPWHNTIINTIRGY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00598 239 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 235 IPR001344 GO:0009765|GO:0016020
Pste2g00598 239 Gene3D Chlorophyll a/b binding protein domain 52 229 - -
Pste2g00598 239 SUPERFAMILY Chlorophyll a-b binding protein 57 236 - -
Pste2g00598 239 FunFam Chlorophyll a-b binding protein, chloroplastic 52 229 - -
Pste2g00598 239 Pfam Chlorophyll A-B binding protein 57 209 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00598 Pste-Chr2 5741393 5743761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00598 56 232 Chloroplast and Mitochondria Gene Families AT3G61470 54.645 2.41e-66 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00598 2 5741393 5743761 Pste2g00598 2 5741393 5743761 ECH