Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00573 ATGAAGAAGAGACAGGTGGTGCTGAAAAGAGATGTGGCCAACACCTCATCTTCAGTGATCAGAAACATAAGATATGGTGAGTGCCAGAAGAATCATGCAGCCAATATTGGAGGGTATGCTGTGGATGGTTGCAGGGAATTCATGGCTAGTACAGGGGATGGAGCTGGTGGGGCTCTTATATGTGCAGCTTGTGGCTGCCACAGGAACTTTCACAGAAAGGAAGTGCAAACTGAGGTAGTCTGTGAGTACTCTCCACCTAATTCTGGTCGCTAA 273 0.4762 MKKRQVVLKRDVANTSSSVIRNIRYGECQKNHAANIGGYAVDGCREFMASTGDGAGGALICAACGCHRNFHRKEVQTEVVCEYSPPNSGR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00573 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Pste2g00573 90 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Pste2g00573 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 78 - -
Pste2g00573 90 Pfam ZF-HD protein dimerisation region 23 75 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00573 Pste-Chr2 5491332 5491604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00573 1 88 Zinc finger-homeobox gene family AT1G18835 75.281 3.72e-41 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pste2g00573 ZF-HD_dimer 2.1e-28 No_clan