Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00556 TCCACTCCGAGGAGAAGGTTTTTGAATGAAGAGGCGAAGGTTGAAAACCGACTACATGATGAGAATATCAGAGGCTCAAAGTTGGACGCGAAGCTGGGCTTCAAAGAGCTTGAAGAGTCTTTGAGGGAGAGAATAATGGAGTCAGAAAAAAACGAGGCAAATCACTTGAAAGAGAGAATGGCAAAACAAAATAAGGAGTGGGCTGTAGGAATCGACCTTGGCACGACATACTCATGTGTTGCTGTATGGCAAGAACAACATCAAAGGGTGGAAATTATTCACAATGATCAAGGCAATAGAATCACTCCCTCTTGTGTTGCTTTTGCCAACAACCAAAGATTGATTGGTGAAGCTGCTAAGAATCAGGCTGCCAGCAACCCCACCAACACTGTCTTTGAAAAATACAGTGATCCTATCATTGAGAATGACATAAGGTTGTGGCCATTCAAGGTCATTGCTGGCACTGATGACAAACCTATGATAGTCGTGTCATACAAGGGTGAGGAGAAGCATATTTCAGCTGAGGAAATCTCATCTATGGTCCTTATAAAGATGCGCGAGATTGCAGAAGCATATTTGGATTCACCAGTAAAGGATGCTGTTATTACTGTGCCTGCTTATTTTAATGACGCTCAGCGCCAAGCAACAAGAGATGCTGGTACTATTGCAGGCCTCAACGTTATGCGAATAGTGAATGAGCCCACAGCTGCAGGCCTTGCATACGGGCTTGACAAGAGAGATAATTGCGTTGGAAAGCGAAATATTTTCATCTTTGATCTTGGTGGTGGTACATTTGATGTGTCTCTCCTCACAATTAAGGATGATGTCTTTGAAGTCAAGGCAACTGCTGGTGACACCCACCTTGGAGGAGAAGACTTGGATAACAGATTGTTGAACTATTTTGTTGAAGAGTTTAAGAGGAAGAAAAAAGTGGATATTAGTGGTTACCCAAGATCCTTGAGAAGGTTGAGAACAGCTTGTGAGAGAGCCACAAGGACACTTTCATTCTCTGCTGATACCACCATTGAGGTAGATGCTATATATGGTAGCATTGACCTTCATTCATCAATCACTCGCTCAAGGTTTGAGGAACTCAACATGGATCTCTTTCGACAGTGTATGGAGACAGTAGATAGGTGTCTTGTTGATTCCAAGATGGACAAGAGTGATATACACGATGTTGTACTCGTGGGTGGTTCTTCTAGGATTCCCAAGGTGCAGCAACTATTGCAAGACTACTTTGATGGGAAGTATCTGTGCAAGGGAATCAATCCTGATGAGGCTGTTGCTCATGGTGCAGCTGTGCAGGCTGCTTTGTCGTGTGGTGGCATTAAGAATGTTCCTGACTTGGTGCTGTTGGATGTTACACCCATGTCACTTGGTATATGCATAAAAGGAGATCTCATGAATGTTGTGATTCCTAGGAACACCACCATTCCTGTGAAGATGGAAAGGGTATATGGAACATCGGAAGATTCTCAAACCTCTGTCTGCATTAAGGTTTATGAGGGTGAAAGGGCAAGAGCTAGTGATAACAATTTGCTGGGTTTTTTAAGACTTCATGGTATTCCTTGTACTCATCGTGGCCATCCTGTAACTGTATCTTTCAGCATAGATGCTGATGGTATCCTAAGCGTATTTGCTGAAGAAAGCAATGGTAGTAAAAATGGGATTACTGTAACCAATGATAATGGAAGACTATCAAATCAAGAAATCATGAGAATGATCGAAGAAGCTGAGATATACAAGGATGAAGACCAGAAGTACAGGAAGAAAGTAAAAGCAATGAATGCTTTGGATGATTATGTTTACAAGATAAAGAAAGCTATAGAGGATGTTGACAACGGTACTTGCAAGCTTCAGTCACAAGACAGAAAGACAATTAATTTGGCAATTTCAAAGGCCAACAATTTGCTTGATGCCAGTCAGCAGTCTGAGGCAGAGGTGTTTGAAGATTATCTGAATGAGGTGAAGAGCCTCGTTGAACCCATTTTGAGTATGAATTCTAGC 2010 0.4214 STPRRRFLNEEAKVENRLHDENIRGSKLDAKLGFKELEESLRERIMESEKNEANHLKERMAKQNKEWAVGIDLGTTYSCVAVWQEQHQRVEIIHNDQGNRITPSCVAFANNQRLIGEAAKNQAASNPTNTVFEKYSDPIIENDIRLWPFKVIAGTDDKPMIVVSYKGEEKHISAEEISSMVLIKMREIAEAYLDSPVKDAVITVPAYFNDAQRQATRDAGTIAGLNVMRIVNEPTAAGLAYGLDKRDNCVGKRNIFIFDLGGGTFDVSLLTIKDDVFEVKATAGDTHLGGEDLDNRLLNYFVEEFKRKKKVDISGYPRSLRRLRTACERATRTLSFSADTTIEVDAIYGSIDLHSSITRSRFEELNMDLFRQCMETVDRCLVDSKMDKSDIHDVVLVGGSSRIPKVQQLLQDYFDGKYLCKGINPDEAVAHGAAVQAALSCGGIKNVPDLVLLDVTPMSLGICIKGDLMNVVIPRNTTIPVKMERVYGTSEDSQTSVCIKVYEGERARASDNNLLGFLRLHGIPCTHRGHPVTVSFSIDADGILSVFAEESNGSKNGITVTNDNGRLSNQEIMRMIEEAEIYKDEDQKYRKKVKAMNALDDYVYKIKKAIEDVDNGTCKLQSQDRKTINLAISKANNLLDASQQSEAEVFEDYLNEVKSLVEPILSMNSS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00556 670 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 445 595 IPR029047 -
Pste2g00556 670 Gene3D - 69 438 - -
Pste2g00556 670 PANTHER HEAT SHOCK PROTEIN 70KDA 68 624 IPR013126 GO:0005524|GO:0140662
Pste2g00556 670 Gene3D Actin; Chain A, domain 4 289 372 - -
Pste2g00556 670 FunFam Heat shock 70 kDa protein 444 596 - -
Pste2g00556 670 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 595 666 IPR029048 -
Pste2g00556 670 ProSitePatterns Heat shock hsp70 proteins family signature 1. 71 78 IPR018181 -
Pste2g00556 670 ProSitePatterns Heat shock hsp70 proteins family signature 3. 394 408 IPR018181 -
Pste2g00556 670 FunFam heat shock 70 kDa protein-like 132 180 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 119 127 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 423 443 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 529 545 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 67 80 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 97 109 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 263 273 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 449 468 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 200 220 - -
Pste2g00556 670 PRINTS 70kDa heat shock protein signature 391 407 - -
Pste2g00556 670 Gene3D - 246 420 - -
Pste2g00556 670 Gene3D - 596 668 IPR029048 -
Pste2g00556 670 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 446 600 IPR029047 -
Pste2g00556 670 FunFam Heat shock 70 kDa 289 372 - -
Pste2g00556 670 SUPERFAMILY Actin-like ATPase domain 252 438 IPR043129 -
Pste2g00556 670 ProSitePatterns Heat shock hsp70 proteins family signature 2. 257 270 IPR018181 -
Pste2g00556 670 Gene3D - 132 180 - -
Pste2g00556 670 Pfam Hsp70 protein 68 666 IPR013126 GO:0005524|GO:0140662
Pste2g00556 670 SUPERFAMILY Actin-like ATPase domain 67 245 IPR043129 -
Pste2g00556 670 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00556 Pste-Chr2 5288847 5293502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00556 60 666 Calmodulin-binding Proteins AT3G12580 64.344 0.0 812