Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00547 CCGCAATTGTCGCAGCACGCAGCACGCAGCAGCCACACTGAAGAACAAACAAACACAAAGCAACGCAACGACAACGACGACGTTTCATTTCCCGGTTTCACTTCTTTTCTTTGTTTCTTTCATTTCAGCATAAAACGCGATATAGAGACTGCGTTTTGTTACTCGAATTGGGTCGAGGATCCGACCCGGATCCATGGGGTGCGTGAGCTCGAAGCAAGCGGTGTCCGTGACGCCGGCGATTGACCACTCCGGCGCGTTTCGGACCAATGCGGCTCTCGGAGAGTCCGAGCGGAAGGAGAAGAAGAAGAGGACTGAGTCAGGGGGAGCGAGTCAGAGCGAGGTGGGTGAGTCGGGGAGAACGAGTTCCAATTGCGACTCGCTCAGCTTCAGGTTGGGGAACCTCCAGAAGTACGTGCAGGGCGAACACGTGGCAGCCGGCTGGCCCGCGTGGCTCAGCGCCGTCGCCGGCGAAGCCATTCACGGCTGGGTACCCCTCCGCGCCGACGCCTTCGAAAAACTTGAGAAGATAGGGCAGGGAACGTATAGCAGTGTGTTTAGGGCGAGGGAGCTTGAGACAGGGAAGATAGTGGCATTGAAGAAGGTGCGGTTCGATAATTTTGAACCGGAGAGTGTGCGGTTCATGGCGCGTGAGATTCTGATTCTGCGACGGCTTGATCATCCCAATATCATAAAGCTGGAGGGTTTGATTACTTCGAGGTTGTCGTGCAGCATTTACCTTGTGTTTGAGTACATGGAACATGACATTACAGGGCTCTTGTCTTCCCCTGATATCAAGTTCTCTGAACCGCAGATAAAGTGCTACATGAAGCAGTTGTTGGCTGGTCTTGAGCACTGTCACTTGCGGGGAGTGATGCATAGGGACATTAAGGGGTCGAATCTTTTGGTGAATAATGAAGGGGTTTTGAAGGTGGCGGATTTTGGGTTGGCGAATTACATCAACTCTGGGCACAGGCAACCTCTGACTAGTCGTGTTGTCACCTTGTGGTACCGGCCGCCTGAGCTTTTGCTCGGCTCAACGGATTATGGTCCGACTGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCAGAGCTGCTTGTAGGGAAGCCTATACTTCAAGGGAGAACAGAGGTTGAACAATTGCACAAAATTTTCAAGCTCTGTGGCTCTCCACCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCTACTTTGTTTAAGCCACAGCATCCATATGATAGTAGCCTTAAACAGTCGTTTAAAGATTTGCCAGGAACCAGTGTAAATCTGCTACAAACTCTTCTTTCTGTAGAGCCATACAAACGTGGGACTGCCACATCTGCTCTCTCGTCAGAGTATTTCAAAACAAAACCTTATGCGTGTGACCCATCAAGCTTGCCGATATACCCACCTAGCAAAGAAATTGATGCAAAACACAAGGAAGAAACAAGGAAAAAGATTAGTGGACGAGCGCGTGGAACTGAAACAAGAAAACCATCAAGAAAGCCACTGGGATTCAGTAAACTAGTGCCAGCAGAGGGTTTGGCAAATCAAACTCAGACTTCCCAAAAGGTAAATGGTAGATCTTTCCGCACTCTTGAAGAAGAGAAGACTAAAATAGGTGGCAAAACACAAAAACCATCCAGTGGTAAACCTGAAGAAGCTTCCCATATGAAGAATGCTTCTCAAGGAGATATTCCCCTTTCTGGACCGTTACAAGTTTCAACATCAAGTGGCTTTGCATGGGCGAAAAATCGTAAAGATGATAACTCATTTCGATCCCATTGTCGAACTATTTCAAGAGGACATATTTTTAATCCATTGGAACCTTCTACATTAAATTCAAGCAATAATTTGGACACCACAAACCAGGAAAATAAGGAGTTTTGTGGGGGATGCACTAATTCTAGGGGGCATGACCTACCTCAAATTTCTAAGCTTTCACTGCAGAATCAGTGGAGTAAGTTTGATCGCCCAGATTCATTTGATGCAGATGAGTACCACTCGCAAGAATTGTCCATGGCCCTTTATCACAGAGAAGATTCAGCTTCCAAGAGAAGTAACCTGAGTTTTCAAGATCAAGGAGAAAAGGTTGAATTTTCTGGACCCCTACTATCTCAGATGCACACGGTTGACGAGCTCTTGGAAAGGCATGAGCGTCATATCCGGCGAACTGTCCGGAGATCATGGTTTCAGAGAGGTAAGAAGCCTGGGAAGTAATTCAAGAAGTTGCATGGGTAATTTACTCTTGTAAAGTGAGACCTTGAGCACCGTATCAAAATGATACAAGAAGTCCTTATGAGAAAAGTTCATCTCCATTCCCCAAGCACACTGCTATAAGCAGACACAATGAACATCAAACTTATACAATGACATACTCTTAATAGAAGCTGGGAAACTCCATAACTTGAGGAGAACACCACTTTCAGCTTTCAAGTTACAGAAATCTAATGACCAAGCAAAGAAAAGAATATAGGCTTGAGTTTCCCTGATTCGGTTAATTATAGATAAGAATTCGTTTCTGTATGATCTAATGTTCTAAACTCCTGCCACTTCTTGCCTTAAATTGTTATCCTCATGCAAGTATCAGTCCGGCAATTGTATATATTTCACATCTGTCGTGACTGGCTTCAGGATATAGTCTAGTT 2649 0.4598 MGCVSSKQAVSVTPAIDHSGAFRTNAALGESERKEKKKRTESGGASQSEVGESGRTSSNCDSLSFRLGNLQKYVQGEHVAAGWPAWLSAVAGEAIHGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSSPDIKFSEPQIKCYMKQLLAGLEHCHLRGVMHRDIKGSNLLVNNEGVLKVADFGLANYINSGHRQPLTSRVVTLWYRPPELLLGSTDYGPTVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQHPYDSSLKQSFKDLPGTSVNLLQTLLSVEPYKRGTATSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHKEETRKKISGRARGTETRKPSRKPLGFSKLVPAEGLANQTQTSQKVNGRSFRTLEEEKTKIGGKTQKPSSGKPEEASHMKNASQGDIPLSGPLQVSTSSGFAWAKNRKDDNSFRSHCRTISRGHIFNPLEPSTLNSSNNLDTTNQENKEFCGGCTNSRGHDLPQISKLSLQNQWSKFDRPDSFDADEYHSQELSMALYHREDSASKRSNLSFQDQGEKVEFSGPLLSQMHTVDELLERHERHIRRTVRRSWFQRGKKPGK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00547 675 FunFam probable serine/threonine-protein kinase At1g54610 93 188 - -
Pste2g00547 675 MobiDBLite consensus disorder prediction 449 464 - -
Pste2g00547 675 SMART serkin_6 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00547 675 Gene3D Phosphorylase Kinase; domain 1 93 188 - -
Pste2g00547 675 MobiDBLite consensus disorder prediction 409 438 - -
Pste2g00547 675 PANTHER CELL DIVISION PROTEIN KINASE 104 394 - -
Pste2g00547 675 CDD STKc_CDK9_like 106 390 - -
Pste2g00547 675 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Pste2g00547 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Pste2g00547 675 SUPERFAMILY Protein kinase-like (PK-like) 99 397 IPR011009 -
Pste2g00547 675 FunFam probable serine/threonine-protein kinase At1g54610 189 429 - -
Pste2g00547 675 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00547 675 MobiDBLite consensus disorder prediction 23 59 - -
Pste2g00547 675 Pfam Protein kinase domain 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00547 675 MobiDBLite consensus disorder prediction 28 43 - -
Pste2g00547 675 MobiDBLite consensus disorder prediction 44 59 - -
Pste2g00547 675 Gene3D Transferase(Phosphotransferase) domain 1 189 428 - -
Pste2g00547 675 MobiDBLite consensus disorder prediction 406 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00547 Pste-Chr2 5144445 5152000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00547 98 449 Core Cell Cycle Gene Families AT5G10270 48.641 1.22e-114 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste2g00547 Pkinase 2e-68 CL0016