Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00544 ATGGCAGTTTCTTCTGCAGCAGCATCCTCCAAGCTCATTCTATTCCCTCATGCATCTTCTTCATCCACTTCATTTAACCCCACAGCCACACCCACACCGTTCCGCTCCACCACCCAGAAACTAACCCCTCTCTCCTCATCCTTCCTCCACCCGTCCACCGTCGTCCGGCGCCGCCCCTCCAGCGGCACCACCCAGCGGCGGGAGCTGAGGGTCCGCGCCGCCAGGGGGAAATTCGAGCGCAAGAAGCCGCACGTGAACATCGGCACCATCGGGCACGTGGACCACGGGAAGACGACCCTGACAGCGGCGCTGACGATGGCCCTGGCGGCCCTCGGGAACAGCGCCCCCAAGAAGTACGACGAGATCGACGCGGCCCCGGAGGAGCGGGCCCGCGGCATCACCATCAACACGGCGACGGTGGAGTACGAGACGGAGAACCGGCACTACGCCCACGTGGACTGCCCGGGCCACGCGGACTACGTGAAGAACATGATAACGGGCGCGGCCCAAATGGACGGCGCCATCTTGGTGGTGTCGGGGGCCGACGGGCCCATGCCCCAGACCAAAGAACACATCCTCCTGGCCAAACAAGTCGGTGTCCCGAACATGGTCGTGTTCCTTAACAAACAAGACCAAGTGGACGACGAAGAGCTTCTCCAGTTAGTGGAGCTCGAAGTCCGAGAGCTTCTCTCCTCGTACGAGTTCCCCGGCGACGACATTCCCATCGTGTCCGGTTCCGCTCTCTTAGCCTTGGAAGCTCTCATGGCCAACCCTCCATCAAACGCGGCGACAACGAACGTCTTCTCCATCACCGGACGTGGAACCGTGGCCACCGGGCGTGTCGAGCGTGGGACCGTCAAAGTCGGCGAGACCGTTGACCTTGTCGGCTTGCGGGAAACCCGGAACACCACCGTCACTGGCGTCGAAATGTTCCAGAAGATTCTCGACGAGGCCATGGCCGGTGACAACGTTGGGCTCTTACTCCGAGGGATTCAAAAGGTGGACATTCAGCGAGGGATGGTGTTGGCGAAGCCAGGGACGATTACCCCGCACACCAAATTCACCGCTATTGTTTACGTCTTGAAGAAGGAAGAGGGTGGGAGGCACTCGCCGTTCTTCGCCGGCTACCGTCCTCAGTTTTACATGAGGACCACCGATGTCACCGGAAAGGTGACTTCTATTATGAACGATAAGGATGAGGAGTCCAAGATGGTCATGCCCGGTGACCGTGTCAAGATGGTCGTCGAGCTTATTGTTCCCGTCGCCTGTGAACAGGGAATGAGGTTTGCTATCAGGGAAGGAGGCAAGACCGTCGGCGCCGGCGTTATTCAGTCCATCATTGAGTGA 1347 0.5976 MAVSSAAASSKLILFPHASSSSTSFNPTATPTPFRSTTQKLTPLSSSFLHPSTVVRRRPSSGTTQRRELRVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIVSGSALLALEALMANPPSNAATTNVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKVDIQRGMVLAKPGTITPHTKFTAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00544 448 FunFam Elongation factor Tu 387 447 - -
Pste2g00544 448 FunFam Elongation factor Tu 258 383 - -
Pste2g00544 448 CDD EFTU_II 266 346 IPR033720 -
Pste2g00544 448 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 123 138 IPR031157 -
Pste2g00544 448 PANTHER ELONGATION FACTOR TU-RELATED 29 447 - -
Pste2g00544 448 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 347 447 IPR009001 -
Pste2g00544 448 MobiDBLite consensus disorder prediction 19 68 - -
Pste2g00544 448 SUPERFAMILY Translation proteins 265 350 IPR009000 -
Pste2g00544 448 CDD EFTU_III 349 443 - -
Pste2g00544 448 Pfam Elongation factor Tu C-terminal domain 347 446 IPR004160 -
Pste2g00544 448 NCBIfam small GTP-binding protein domain 85 217 IPR005225 GO:0005525
Pste2g00544 448 PRINTS GTP-binding elongation factor signature 166 177 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 PRINTS GTP-binding elongation factor signature 86 99 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 PRINTS GTP-binding elongation factor signature 130 138 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 PRINTS GTP-binding elongation factor signature 150 160 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 PRINTS GTP-binding elongation factor signature 203 212 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 FunFam Elongation factor Tu 73 270 - -
Pste2g00544 448 Hamap Elongation factor Tu [tuf]. 73 448 IPR004541 GO:0003746|GO:0005525|GO:0006414
Pste2g00544 448 Gene3D - 73 265 IPR027417 -
Pste2g00544 448 MobiDBLite consensus disorder prediction 19 60 - -
Pste2g00544 448 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 82 303 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 Pfam Elongation factor Tu GTP binding domain 82 251 IPR000795 GO:0003924|GO:0005525
Pste2g00544 448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 249 IPR027417 -
Pste2g00544 448 Gene3D Translation factors 266 383 - -
Pste2g00544 448 Pfam Elongation factor Tu domain 2 274 342 IPR004161 GO:0005525
Pste2g00544 448 Gene3D Translation factors 387 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00544 Pste-Chr2 5114021 5115465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00544 80 446 Eukaryotic Initiation Factors Gene Family AT5G60390 29.318 1.18e-39 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00544 2 5114021 5115465 Pste2g00544 2 5114021 5115465 ECH
Pste6g02007 6 9378999 9380837 Pste2g00544 2 5114021 5115465 PCT