Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00537 ATGTCAGAGCAGGAAACCTATTCATGGGGCTTCCTGTTTGTCAGTTTCTTGATCCTTTTCTCAGGTAAATTAGTTGTTGGGGATTCATTGGAGACTGATGCACAAATTCTGCTGAGTCTGAAATCATATTTGCAAAGCCAAACTCGTGCAAATAGAGGAGGGTACATGAGCTGGAACACAAGCAGTTCAAAATCAAATCCTTGTGCTTGGTCAGGAATCTCGTGTAGCATCTTCAACGAGACAATATGGAGGGTTGTGAAAGTAGACATATCTTACAGTGACATATATGGTAAAATATTCGATAGTTTCTCTCAACTCACTGAGCTCAGACACCTTGATATCTCTTGGAACTCTCTCTCTGGGGTGATTCCTGTTGACTTGAGGAAGTGTCACAAGCTTGAGTTTCTTAATCTCTCTCGTAATACTCTTGAAGGGGAGTTGAATTTGAAGGGCTTGACACAGTTGCAAACACTTGACTTGTCTGTTAATAGGTTTCATGGGGAACTTGGGTTGAGTTTCCCTGCCATTTGTGATAGTTTGGTGACTTTGAATGTTTCAGAAAATCACTTGAGTGGTGGGATTGATGGCTTCTTTGATAAATGTTTGAGGTTGCAGAACTTGGATTTGAGCATGAACCAATTTAGTGGGGCCTTATGGACTGGATTTTCCAGACTGAGGCAGTTTTCAGTGTCAGAGAATTTTCTCACTGGGGTTGTTCCTTCCCAGGCTTTTCCAATTAGTTGCAGCCTTGAAAACCTTGACCTTTCGGTAAATGGATTTGTTGGTAAGCCCCCCAAGGAGGTTTCTAATTGCAAGAATTTAGTGGTTCTCAACCTTTCTCATAACAAATTCACTGGAGATATTCCTAGTGAAATTGGTTCCATTTCTAGTCTTAAGGGATTGTTCCTTGAGAACAATACTTTCTCAAGGAATATCCCGGAGTCCCTTTTGAACCTGACCAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTGGGGATGTGCAAGAGATTTTTGGGAAATTCAAGCAACTGAAGTTTCTTGTGCTGCACTCAAATTCCTATATTGGAGGGTTGCACACATCAGGCATTTTTTCGTTGACAAACCTTAGCCGGTTGGACATAAGCTTCAATAACTTTTCAGGTCCGTTACCTGTTGAAATCTCACAAATGCCTGGACTCACTTTCTTAACCTTAACCTACAACCAGTTCTCTGGATCTATTCCATCTGAATTGGGAAAGTTGACTCGCCTTATGGCACTTGATCTTGCCTTCAACAATTTCAATGGATCAATCCCACCGAGCCTTGGAAACTTGAGTTCTCTCTTATGGCTAACCCTTTCGGATAATTCATTGACTGGCGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGTTGAACCTTGCAAACAACAAACTCTCTGGAAAAATTCCTTTGGAGCTAACAAGAATTGGAATGAATGCAAGGGCCGCATTTGAATCCAATAAAAAAAGTCTTGGGGGAGTTGTTTATGGCAATAGTGAGTGCTTGGCAATGAGGAGATGGATACCTGCTGATTACCCTCCATTCAGCTTTGTGTATACCATTCTAACAAGGAAGAATTGTAGGTCCCTTTGGGACAGGTTGCTCAAAGGATATGGCATTTTCCCCATGTGTACATCTGAGCCTTCTTCTAGATCATCACACATAGCAGGGTATGTTCAGCTTAGTGGAAACCAATTGAGTGGTGAAATTCCTTCAGAAATTGGGACCATGGTGAACTTCAGCATGTTGCATTTGGGGGATAACAAGTTCACTGGGAAATTCCCTCAAGAGATGGTAGGTTTGCCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAACTTCCTAGTGATATTGGCAACATGAAGTGTCTACAGGATCTTGATTTGTCTTGGAACAATTTCTCTGGAACATTTCCCATAAGTTTGGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAACCCTCTTATATCTGGTACAGTCCCACCAGCTGGACACTTGCTCACTTTTGACAAGGATTCATATTTGGGTAACCCCCTCTTGGAACTCCCAAAGTTCTTTAACATCTCTGATGGTAGAAATAGAACTTTACACAGAATCTTGAAAAATCCCACAAAATGGTCTTTGATTTTGGCTCTAGCACTGGTTGTCATGGTCTTTGGACTTCTTTTCCTGGTAATATGTTTCTTGGTGAAAAGTCCAAATGTGGAAGCAGGATACCTCATGAAGAATACAAAGAAGCAAGCACATGATTCAGGAAGCTCCAGATCCTCATCATGGTGTTCTGATTCTGTTAAGATATTCCACTTGAACAAGACAGTTTTCACACATGCGGACATCTTGGCAGCAACCTCCAACTTCACTGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACTGTTTATAGAGGGCTGTTTCCTGATGGGAGAGAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGAACCGAGGGGGAAAAAGAATTCAAAGCTGAAATGAAGGTTCTTAGTGGTCATGGATTTAACTGGCCTCATCCAAACCTTGTCACACTCTATGGTTGGTGCCTTTATGGTTCACAAAAGATACTTGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTCGTGACTGACACAAAAAGGTTGACATGGAAGAGGCGCATAGAAGTGGCAATTGATGTTGCTAGAGCACTTGTGTATTTACACCATGAATGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAATGTGTTGCTAGACAAGGATGGGAAGGCCAAGGTAACAGATTTTGGACTTGCTAGAATTGTTGATGTTGGAGACAGTCATGTGAGTACTATAGTGGCTGGGACAGTGGGGTATGTTGCACCAGAATATGGACAAACATGGCAAGCCACAACAAAAGGGGATGTGTATAGTTTTGGGGTGTTGGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTTGATGGAGGTGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGGTTCTGGAAGACAAGGGTTGAGTCAATCTGTGCCTGTTTTGTTGAAGGGAATTGGGGTAGTTGAGGGTGCAAAGGAGATGGGTGAGTTGCTCCAAGTTGGAGTGAGGTGCACACATGATGCACCACAAGCTAGGCCTAACATGAAGGAGGTTCTAGCTATGCTCATTAAGATATACAATCCCATTGGGGACCCAAATTATGGACACCTTGTGTAG 3282 0.426 MSEQETYSWGFLFVSFLILFSGKLVVGDSLETDAQILLSLKSYLQSQTRANRGGYMSWNTSSSKSNPCAWSGISCSIFNETIWRVVKVDISYSDIYGKIFDSFSQLTELRHLDISWNSLSGVIPVDLRKCHKLEFLNLSRNTLEGELNLKGLTQLQTLDLSVNRFHGELGLSFPAICDSLVTLNVSENHLSGGIDGFFDKCLRLQNLDLSMNQFSGALWTGFSRLRQFSVSENFLTGVVPSQAFPISCSLENLDLSVNGFVGKPPKEVSNCKNLVVLNLSHNKFTGDIPSEIGSISSLKGLFLENNTFSRNIPESLLNLTNLFILDLSRNKFGGDVQEIFGKFKQLKFLVLHSNSYIGGLHTSGIFSLTNLSRLDISFNNFSGPLPVEISQMPGLTFLTLTYNQFSGSIPSELGKLTRLMALDLAFNNFNGSIPPSLGNLSSLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLSGKIPLELTRIGMNARAAFESNKKSLGGVVYGNSECLAMRRWIPADYPPFSFVYTILTRKNCRSLWDRLLKGYGIFPMCTSEPSSRSSHIAGYVQLSGNQLSGEIPSEIGTMVNFSMLHLGDNKFTGKFPQEMVGLPLVVLNMTRNNFSGELPSDIGNMKCLQDLDLSWNNFSGTFPISLAHLDELSRFNISYNPLISGTVPPAGHLLTFDKDSYLGNPLLELPKFFNISDGRNRTLHRILKNPTKWSLILALALVVMVFGLLFLVICFLVKSPNVEAGYLMKNTKKQAHDSGSSRSSSWCSDSVKIFHLNKTVFTHADILAATSNFTEERVIGRGGYGTVYRGLFPDGREVAVKKLQREGTEGEKEFKAEMKVLSGHGFNWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLTWKRRIEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKDGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMGSGRQGLSQSVPVLLKGIGVVEGAKEMGELLQVGVRCTHDAPQARPNMKEVLAMLIKIYNPIGDPNYGHLV 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00537 1093 Pfam Protein kinase domain 804 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00537 1093 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 505 - -
Pste2g00537 1093 Gene3D Ribonuclease Inhibitor 246 337 IPR032675 -
Pste2g00537 1093 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 884 1084 - -
Pste2g00537 1093 SUPERFAMILY Protein kinase-like (PK-like) 782 1078 IPR011009 -
Pste2g00537 1093 SUPERFAMILY L domain-like 571 698 - -
Pste2g00537 1093 SMART LRR_typ_2 368 392 IPR003591 -
Pste2g00537 1093 SMART LRR_typ_2 106 129 IPR003591 -
Pste2g00537 1093 SMART LRR_typ_2 440 464 IPR003591 -
Pste2g00537 1093 SMART LRR_typ_2 319 342 IPR003591 -
Pste2g00537 1093 SMART LRR_typ_2 416 439 IPR003591 -
Pste2g00537 1093 SUPERFAMILY L domain-like 96 485 - -
Pste2g00537 1093 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Pste2g00537 1093 Gene3D Transferase(Phosphotransferase) domain 1 885 1085 - -
Pste2g00537 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Pste2g00537 1093 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Pste2g00537 1093 Gene3D Ribonuclease Inhibitor 569 705 IPR032675 -
Pste2g00537 1093 Gene3D Ribonuclease Inhibitor 338 521 IPR032675 -
Pste2g00537 1093 SMART serkin_6 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00537 1093 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 248 1079 - -
Pste2g00537 1093 Gene3D Ribonuclease Inhibitor 175 245 IPR032675 -
Pste2g00537 1093 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Pste2g00537 1093 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Pste2g00537 1093 Gene3D Phosphorylase Kinase; domain 1 765 883 - -
Pste2g00537 1093 Pfam Leucine rich repeat 101 143 IPR001611 GO:0005515
Pste2g00537 1093 Pfam Leucine rich repeat 345 405 IPR001611 GO:0005515
Pste2g00537 1093 FunFam Leucine-rich repeat receptor protein kinase MSP1 767 883 - -
Pste2g00537 1093 ProSiteProfiles Protein kinase domain profile. 804 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00537 1093 CDD STKc_IRAK 810 1080 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00537 Pste-Chr2 5019824 5023411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00537 68 1080 Receptor kinase-like Gene Family AT5G07280 32.538 3.92e-146 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pste2g00537 Pkinase 7.8e-44 CL0016