Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00510 ATGCGAAGAACTAGTATAGGAATGGTGGGCAAAACTCACTTATTGTTCTTTCCACTATTCTTGCTCTTAATAGCTACCAACGCGAAACTTGATCTCTGCCCTTCAGACTTGAAGGCACTGTTAGCGCTGCAAAAGGACCTGGGAGTCAACGGTCAACTCCAGGCAAATGAGGTTTGTGATAGCGAGGGCGTGTTTTGTGAGAGGAGGCTCTCCGCCTCTGACAAACAAACCTACGTGCTCCGAATCATCAGACTCGTGTTCAAATCGAAGGGCTTGAACGGTTTCTTGTCCCCTGCCATTGGACGCCTCAGCGAGCTCAAAGAGCTTTCTCTCTCCGACAACCAACTCGTTGACCGACTCCCCACCCAAATCGTTGACTGCCGAAAGCTCGAAATCCTCGACCTCGCCAACAACCGCTTCTCCGGCGAAGTCCCCTCCCAATTCTCCTCCCTCACCCGCCTCCGCGTGGTCGACATCTCCTCCAACAAACTCTCCGGCAACCTCAACTTCCTCAAATACTTTCCCAATTTGGAAACCCTCTCCATCGCCGACAACCTCTTCACCGGACGTGTCCCTCCCTCCGTCCGCTCCTTCCGCAACCTCCGACGCTTCAACTTCTCCGGTAACCAGTTCCTTGAAACCTCTCTCAGGCTCCAATCTTCATCCTCACCAGACGGCGTTCTCTCTAGACGCCATCTCTTAGCCGGTGACGGCGAGGCTCCTTCTCCGGAACCCGCCTCACAGAAGAACAAGTCCAAATCCAACACCACTTCTTCTCATGCTGCTGGCGCACCTGGTCCCGCGCCTCATGAGCCGAAGCGCAAGCACAAGCACCGTAGGAGAAAACTGGCAGGGTGGATTCTCGGGTTTGTGGCGGGGGCACTGGCTGGAACCTTATCGGGATTCGTGTTTTCTCTTCTGTTCAAACTGGCTCTGGCTTTGATCAAAGGAAGAGGAAGGAGAGCGGGTCCTGATATTTACAGTCCCCTGATTAAGAAAGCAGAGGACTTGGCCTTCTTGGAGAAAGAAGACGCTCTGGCCTCGTTGGAAATCATTGGAAGAGGGGGCTCCGGCGAGGTTTACAGGGCGGAGTTACCAGGAAGCAATGGCAAAATGATTGCCATAAAGAAAATCATTCAACCTCCTAAAGAGGGGTCTGAATTGGCAGAAGAAGACAGCAAGCAACTGACCAAGAAAATGAGGCAAATAAAATCAGAGATCAACACCGTGGGTCAGATTAGACACCGCAACCTTCTTCCTCTGCTGGCGCACGTGTCGAGGCCAGACTGTCACTACCTGGTGTACGAGTTCATGAAGAATGGGAGCTTGCAGGACACGCTAACAAACGTTGAAAGGGGCGAGGCAGAGTTGGATTGGTTGTCGCGGCACAGAATCGCTCTTGGTGTGGCTGCAGGACTTGAATACCTTCACATGAGTCACAACCCCAGAATCATTCATAGGGATCTCAAGCCTGCTAATATTCTCCTTGATGATGACATGGAAGGCCGCATAGCTGATTTTGGCCTCGCCAAGGCAATGCCTGATTACAAGACCCACATCACAACCTCCAATGTTGCTGGCACTATTGGCTACATTGCCCCCGAGTATCATCAGATACTCAAGTTCACTGATAAGTGTGATATCTACAGTTTTGGAGTTATTCTTGGGGTCTTGGTCATTGGGAAGCTTCCTTCTGATGAGTTCTTCCAGAACACTGAGGAGATGAGTTTGGTCAAGTGGATGAGGAAGGTCTTGAGTTCTGAGAATCCCAAGGAGGCTATTGATTCAAAACTGCTGGGGAATGGGTACGATGACCAGATGCTTCTGGTTTTGAAGATTGCATGTTTTTGCACTCTCGATGATCCCAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGCATGCTTTCGCAGATCAAACACTGA 1923 0.5086 MRRTSIGMVGKTHLLFFPLFLLLIATNAKLDLCPSDLKALLALQKDLGVNGQLQANEVCDSEGVFCERRLSASDKQTYVLRIIRLVFKSKGLNGFLSPAIGRLSELKELSLSDNQLVDRLPTQIVDCRKLEILDLANNRFSGEVPSQFSSLTRLRVVDISSNKLSGNLNFLKYFPNLETLSIADNLFTGRVPPSVRSFRNLRRFNFSGNQFLETSLRLQSSSSPDGVLSRRHLLAGDGEAPSPEPASQKNKSKSNTTSSHAAGAPGPAPHEPKRKHKHRRRKLAGWILGFVAGALAGTLSGFVFSLLFKLALALIKGRGRRAGPDIYSPLIKKAEDLAFLEKEDALASLEIIGRGGSGEVYRAELPGSNGKMIAIKKIIQPPKEGSELAEEDSKQLTKKMRQIKSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLTNVERGEAELDWLSRHRIALGVAAGLEYLHMSHNPRIIHRDLKPANILLDDDMEGRIADFGLAKAMPDYKTHITTSNVAGTIGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQNTEEMSLVKWMRKVLSSENPKEAIDSKLLGNGYDDQMLLVLKIACFCTLDDPKERPNSKDVRCMLSQIKH 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00510 640 SMART serkin_6 346 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00510 640 FunFam Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 149 233 - -
Pste2g00510 640 Gene3D Phosphorylase Kinase; domain 1 334 437 - -
Pste2g00510 640 SUPERFAMILY RNI-like 83 484 - -
Pste2g00510 640 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Pste2g00510 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 81 639 - -
Pste2g00510 640 Gene3D Transferase(Phosphotransferase) domain 1 438 640 - -
Pste2g00510 640 SUPERFAMILY Protein kinase-like (PK-like) 345 635 IPR011009 -
Pste2g00510 640 FunFam Leucine-rich repeat receptor-like protein kinase 438 640 - -
Pste2g00510 640 ProSiteProfiles Protein kinase domain profile. 346 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00510 640 MobiDBLite consensus disorder prediction 245 262 - -
Pste2g00510 640 Pfam Protein kinase domain 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00510 640 Gene3D Ribonuclease Inhibitor 36 168 IPR032675 -
Pste2g00510 640 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 333 437 - -
Pste2g00510 640 Coils Coil 386 406 - -
Pste2g00510 640 MobiDBLite consensus disorder prediction 235 278 - -
Pste2g00510 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Pste2g00510 640 ProSitePatterns Protein kinases ATP-binding region signature. 352 377 IPR017441 GO:0005524
Pste2g00510 640 Gene3D Ribonuclease Inhibitor 169 223 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00510 Pste-Chr2 4709265 4711187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00510 9 640 Receptor kinase-like Gene Family AT2G31880 64.308 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pste2g00510 Pkinase 1.7e-41 CL0016