Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00509 TGGAGAGAGAAAGAGAGAGAATTGGAGAAACAAACGCTCACTCACTCACTCACTCTTGTTTGTTCTTTTCTCCCTTGGCTTCCTCATCCATCATCGCTATCATTAGCAACAAAGGTAACTCACACAACTCTTTCTCCTCCTCCTCCACCTCTTCAAATCTTGCACTCACCTTGGAGTTTTCGTGTGAAACCAGACATGGGTTCAATGGAAGAAGATCAAGAAGTGAGGCATGTGTGCAAGTTCTGCAGCAAGAGCTTCCCTTGTGGAAGATCCTTGGGAGGGCATATGAGGTCACATGTCACCAATGGTTCAACCGAGGCAGAGAAGGTTTCATCTTTGAATGGTAATATCAATGGTGGAGGAGACATAGGGACTGGTTCTGAAGGAGGGACCAACAATGGTGGAGGAGGAGGAGGAGGAGGGTATGGTCTGAGAGAGAACCCGAAGAAGACTTGGAGGTTCAATGATTCGAGTGATGACACTTTGGTATTGGACAAGTTGTGCAAGGAGTGTGGCAAAGGGTTTCACTCTTGGAAAGCTCTGTTTGGTCACATGAAGTGCCACTCGGAGAGAGTGTCTCAAATTAATAGCAGCTTATTGGAGGATCAAGATTCGTGGACTGATAACACCAATGCTAGCCAGAAGATGGTGTTTGATGATAGCCACTCTGACACTGAGGCCACTGCTCCAAACCGAAGGAGAAGATCCAAGAGGAGAAGGACAAGGTACATGGCTCCATCAACTTCCTCTGTGTCCCTTGTTTCTGAGGCTGAGCAGGAGCAGGAAGAGGTTGCCATGAGTTTGATGATGCTTAGTAGGGATGTTACTCCTTGGTGTGGTCTCAGTTCTGTTAACTCATTGCAATTTGAATCTCCTTCTCTGGTTCCAACCAATTTGGGTTCTAAGGTGGAGGGCAAGAGGGTTATCTCCAATGGTGCTGAAAAAAAGGTTATAAAACTAAGGGATATGAAGTGGGAGATTAGCAATTTGGATGCCTCAAATCTCAACTCCAAAGGGAAAATAAGTTCAGAACATTTGGGTTCTGAGAGTTCTGGAAGTGGATTTGGGGTCAACAAGACCATGGTTTCCATTCATGGGAAGGATAAGAAGGTTGAGCTAGATTCTAATTCTGCATTTGAGGACAATGGAACAAATTATAATAGTAATAATAAGTACACTTCAATCAAGGCAAAATTTATGGATTCTGAGTTGAAGTCAAGTTCTTTGAAGAGTTGGATGAACAACAAGCCTTCAGAAGGGGAATTCAGCAAAAGCTCCAATAAGAGAGGAAAGTTTGAGTGTACTACTTGCAAGAAAATTTTCCACTCATACCAAGCACTTGGAGGCCACAGAGCTAGTCACAAGAAGATCAAGGGCTGCTTTGCTTCAAGAAATGAGAGCAGTGAAAACAGCACTGAGTTGGAGGCAGACTACTCCCCTGATCCAGCAACAGAAAGTATTTTCCTGAAGAATGAGTATGTGGAAGAACATGAAATGGTTACTGTTACTACTACTGCTACTGGTTTTGACAATGAGGTAGACACAGTGAGAGAGTCCAAGAAGGGAAAACATGAGTGCCCAATTTGCCTCAAAGTTTTCCTCTCTGGCCAAGCCTTGGGTGGCCACAAGAGATCTCATCATTTGGCTGGTGGGTCTGAGAGTGCTAGAAACTGTCAAAGTCAAACAGTTGTACTTGAGGGAGCTACCCCAGAAATTAGGGACTTTTTTGATCTTAATCTTCCTGCTTCTACAGAAGAAGAAGGTAATAGCCATGGCCATGCTGAGTCTTACAGACCTTGGTGGGTAGTAGGAGGCAATCACAAGCAGGAGGCACTGGGCCAACTACATGGTGCAGCTTACAAAACGGCACTTGTTGGCAGAACTAGAGGGTTTGATCACTGGCACAGTGTGGAGGAGGCTTTGATAAACTTAGCTGTAGTAGCTGGCAATGTTGCACTGCTTTGTCAACTAGCA 1974 0.4473 WREKERELEKQTLTHSLTLVCSFLPWLPHPSSLSLATKVTHTTLSPPPPPLQILHSPWSFRVKPDMGSMEEDQEVRHVCKFCSKSFPCGRSLGGHMRSHVTNGSTEAEKVSSLNGNINGGGDIGTGSEGGTNNGGGGGGGGYGLRENPKKTWRFNDSSDDTLVLDKLCKECGKGFHSWKALFGHMKCHSERVSQINSSLLEDQDSWTDNTNASQKMVFDDSHSDTEATAPNRRRRSKRRRTRYMAPSTSSVSLVSEAEQEQEEVAMSLMMLSRDVTPWCGLSSVNSLQFESPSLVPTNLGSKVEGKRVISNGAEKKVIKLRDMKWEISNLDASNLNSKGKISSEHLGSESSGSGFGVNKTMVSIHGKDKKVELDSNSAFEDNGTNYNSNNKYTSIKAKFMDSELKSSSLKSWMNNKPSEGEFSKSSNKRGKFECTTCKKIFHSYQALGGHRASHKKIKGCFASRNESSENSTELEADYSPDPATESIFLKNEYVEEHEMVTVTTTATGFDNEVDTVRESKKGKHECPICLKVFLSGQALGGHKRSHHLAGGSESARNCQSQTVVLEGATPEIRDFFDLNLPASTEEEGNSHGHAESYRPWWVVGGNHKQEALGQLHGAAYKTALVGRTRGFDHWHSVEEALINLAVVAGNVALLCQLA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00509 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 193 IPR013087 -
Pste2g00509 658 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Pste2g00509 658 Gene3D Classic Zinc Finger 429 546 - -
Pste2g00509 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 432 459 IPR013087 -
Pste2g00509 658 SUPERFAMILY beta-beta-alpha zinc fingers 77 188 IPR036236 -
Pste2g00509 658 ProSitePatterns Zinc finger C2H2 type domain signature. 434 454 IPR013087 -
Pste2g00509 658 MobiDBLite consensus disorder prediction 214 256 - -
Pste2g00509 658 ProSitePatterns Zinc finger C2H2 type domain signature. 168 188 IPR013087 -
Pste2g00509 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 524 546 IPR013087 -
Pste2g00509 658 MobiDBLite consensus disorder prediction 99 144 - -
Pste2g00509 658 SUPERFAMILY beta-beta-alpha zinc fingers 432 546 IPR036236 -
Pste2g00509 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Pste2g00509 658 Pfam C2H2-type zinc finger 432 456 - -
Pste2g00509 658 Pfam C2H2-type zinc finger 168 189 - -
Pste2g00509 658 Pfam C2H2-type zinc finger 76 99 - -
Pste2g00509 658 Pfam C2H2-type zinc finger 524 547 - -
Pste2g00509 658 Gene3D Classic Zinc Finger 62 192 - -
Pste2g00509 658 MobiDBLite consensus disorder prediction 99 132 - -
Pste2g00509 658 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 69 601 - -
Pste2g00509 658 SMART c2h2final6 166 188 IPR013087 -
Pste2g00509 658 SMART c2h2final6 524 546 IPR013087 -
Pste2g00509 658 SMART c2h2final6 432 454 IPR013087 -
Pste2g00509 658 SMART c2h2final6 77 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00509 Pste-Chr2 4705077 4708695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00509 69 586 C2H2 Transcription Factor Family AT1G26610 32.737 4.09e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste2g00509 zf-C2H2_6 1.7e-10 CL0361