Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00497 ATTCTTATCGAACTTCCCAATGAGTTGGCTTATATACGTATATATATCCCTATAAAAGCCATGGCATTCCTCGTACCTTGCACATTATTCATCAACCCTCAAACCAAAACACTTCATTCAATCATAATCACAATCACTCTCACCTCATATGGATGCCCCTGTTAATGTCTCCCCATTACCCAAACCCGACCTTTATTTACACACTCCCTCTGGGAAACGCATTCCAGCGCATTCAACCGTTTTGGCTTCCGCATCTCCAGTTTTACAAAAAGTGATAGCGTCCAACGGAATCGTTAAAATCCAGGGCGTTCCAGACGGAGCCGTGACGGCGTTCGTGGCGTTCCTGTACTCCTCCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGGAGGAGGATATGGACACGTATGGAATACACCTTCTAGCATTGTCGCACGTGTACTTGGTGACGCAGCTGAAACAGAGGTGCATCAAGGGCGTGGGGGAGCGCCTGAGCACGGAGAACGTGGTGGACGTGTTGCAACTCGCTCGCCTCTGCGACGCACCGGATCTTTACCTCCGATGCGTGAAACTCCTCACGAAGCATTTCAAAGCCGTGAAAGAAACAGAGGGATGGAAATTCCTTGAGAAGCACGATCCCTGGCTGGAACTCGACGTTCTCCGCTTCATGGACGATCACGAACAAAGGAAGAGGAAATTGAGGAAGTGGAAGAAGGAGGAGAGGTTGTACTGGGAACTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGGTGCAGGCACGTGGGACCCTGCGATGTGGAGGTGAGGACACAGAGAGGAGCGTGCTCCAACTATGGCACGTGTGAGGGTTTGCAGGTTTTGATTAAACACTTCGCCACGTGCCAGAAGAGGGTCAAGGGAGGGTGTTTGCGGTGTAAGCGCATGTGGCAGCTCTTTAGACTTCACTCTTCCATTTGCTTCCGACAAGATTCCTGCAAGGTCCCTCTCTGCAGGCAAATTAGATTGAAGATGGAGCAAGAGAACAGGAAAGATGACGCAAGGTGGAATGTACTAGTGAGGAAGGTGGCCTCAGCCAAAGCCATGTCTTCCTTGGCAGAATCAAAGAGAAAGCGGATAGAGGAAATTAGACCAGAAGGACCATGAAGAATCCTGCCATCACAAGTTTAATTTAATGTAACGGGCAATGCTTTATCGCCTTTGATTTTATAGAGAGACGTTTGATGTACTTTGTATTGTAGAACTAGATCGACACAGCAGGGGTTTGGATAGTGTGATCCTATTGTGCTTCCCTTTTTCAGTCATTATTAGCTAGGTTCCATCCCTGGGTACAAATAAATTACAAAATAATCGAGAA 1370 0.4869 MDAPVNVSPLPKPDLYLHTPSGKRIPAHSTVLASASPVLQKVIASNGIVKIQGVPDGAVTAFVAFLYSSRCRCRCRCRCRCREEDMDTYGIHLLALSHVYLVTQLKQRCIKGVGERLSTENVVDVLQLARLCDAPDLYLRCVKLLTKHFKAVKETEGWKFLEKHDPWLELDVLRFMDDHEQRKRKLRKWKKEERLYWELSEAMECLEHICTEGCRHVGPCDVEVRTQRGACSNYGTCEGLQVLIKHFATCQKRVKGGCLRCKRMWQLFRLHSSICFRQDSCKVPLCRQIRLKMEQENRKDDARWNVLVRKVASAKAMSSLAESKRKRIEEIRPEGP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00497 336 CDD BACK 118 165 - -
Pste2g00497 336 Gene3D - 118 190 - -
Pste2g00497 336 FunFam BTB/POZ and TAZ domain-containing protein 2 189 315 - -
Pste2g00497 336 SMART TAZ_2 193 287 IPR000197 -
Pste2g00497 336 Pfam BTB/POZ domain 14 111 IPR000210 GO:0005515
Pste2g00497 336 ProSiteProfiles BTB domain profile. 13 70 IPR000210 GO:0005515
Pste2g00497 336 SUPERFAMILY TAZ domain 193 295 IPR035898 -
Pste2g00497 336 Gene3D TAZ domain 191 315 IPR035898 -
Pste2g00497 336 FunFam BTB/POZ and TAZ domain-containing protein 2 118 188 - -
Pste2g00497 336 SUPERFAMILY POZ domain 14 147 IPR011333 -
Pste2g00497 336 Gene3D Potassium Channel Kv1.1; Chain A 12 117 IPR011333 -
Pste2g00497 336 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 12 326 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00497 Pste-Chr2 4579662 4583853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pste2g00497 BTB 4.1e-06 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00497 2 4579662 4583853 Pste2g00497 2 4579662 4583853 ECH
Pste6g01934 6 8959494 8962681 Pste2g00497 2 4579662 4583853 PCT