Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g00476 | AAAATAAATAATGGGACTAGGTTCTGAAGGAAACGGTGACGTTTTACCATGGCTGAAATCGCTACCCGTGGCCCCGGAGTACCGGCCAAGCGCGGCGGAGTTCCAAGATCCTATTGGCTACATATTCAAGATCGAGAAGGAAGCTTCCAAGTACGGTATCTGCAAAATCATCCCTCCATTCCCACCTTCTTCGAAGAAAACCGCCATCGCCAACCTCAACCGATCACTCGCCGATGTAGGTTCTACATTCACCACGCGCCAGCAGCAGATCGGGTTCTGCCCCCGCAGGCCCAGGCCCGTCCAGCGGCCCGTTTGGCAGAGCGGCGACCGCTACACCTTCAGCGAGTTTGAGTCCAAGGCCAAGTCCTTCGAGAAGACATACCTAAAACGGCATGCTAAGAAGGGCTCGGGCTCGGGCTCGGGCTTGGGCCCGCTGGAGACAGAAACGCTTTTCTGGAAGGCCACGCTGGACAAACCCTTCTCCGTGGAATACGCGAACGACATGCCGGGTTCCGCGTTTTCCCCGAAATGCCGGCACACAGGGGATCCCAGCTCTCTGGCGGACACTCCGTGGAACATGAGAGCTGTTTCTCGGGCCAACGGCTCTCTCTTGCAGTTCATGAAAGAGGAAATTCCTGGCGTTACTTCTCCTATGGTTTACGTGGCCATGCTCTTCAGCTGGTTCGCTTGGCACGTCGAGGACCACGACTTGCACAGCTTGAACTACCTCCACATGGGCGCCGGCAAAACCTGGTACGGCGTTCCTCGCGACGCCGCCGTCGCATTTGAGGAAGTCGTTAGGGTTCACGGCTACGGCGGCGAGATTAACCCCCTCGTAACTTTTGCTATTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTTATTGGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCGAATATTGCTACACCTGAGTGGTTGAGATTTGCTAAAGATGCTGCTATTCGTAGGGCTTCACTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCTGGCGTCAGTGCTGAACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAGGATGTGTTGCAGAACAATGATCTGCTTCATATACTTGGGAGAGGATCTGCTGCAGTACTTCTTCCTCGTAGTTCAGTTGATATTTCTGTCTGCTCAAAATTACGTGTTGGATCTCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTGCTCAAAAGGTTTTGTGTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAAGTTTACTACGTTGTGTGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGCAACATAACCATTTCAAGTTCTAAGCCACTTCAAAGAGATATCGAAAGAGAAAATTGTCAAGGAGATGGGTTGTCAGATCAGAGACTGTTTTCATGTGTCACATGTGGAATATTAAGCTTTTCTTGTGTTGCTATTGTACAACCTAGAGAACCTGCAGCTAGATATCTTATGTCAGCTGATTGCAGCTTCTTTAATGATTGGGTTGTTGGGTGGATTAAAAAGAATGTCCAAGATGTTATACATGATGTTCCTGTTCAATCTTCTCAGGATGCTTTAAATACTGAAAGTGCATATGGCAATACGGCTCTTGCATTATTGGCTTCAGCATATGGAAATTCTTCTGACTCTGAAGAAGATATGATTACGGTTGACCGTCATGAATCAAATGAGATAAACTCTGCTTCAGAAAGTTTACTTTCTAATACTCAAGATTCCCATGCCAGTCCCATGACTGCACTTGACAGGGTAGATATTCCTTCAAAGGGTGCCAGTGGTGAGGATTTTATACATAGTAGATTTGACTGTAGTTTGAGTCATCACTCTATAGACCACTCTTTTAAGAAACAGGATTTTAATATGGTTACATTTGAAAGTTCGAGGATGGTGCCTAATTCCACCTCTAATTATTCCCAAGATGCTCATGATGCTGAAAGGTCATTGTCTAACAAGTGTATGGTTCCCTTTGATAATAAAAATGATTCGATGATGCTACAATCTGATGAAGACTCGTCCAGAATGCATGTTTTTTGTCTAGAGCATGCTGCAGAAGCAGAGCAGCAACTTCGCCCAATAGGTGGAGCCCACATATTTCTCCTATGTCATCCAGATTATCCTAAGATAGAGGCTGAAGCAAAAATGGTGGCAGAAGATTTGGGGATTGATTACATGTGGAAAAATATTGAATACAGGCATGCTTCCAAGGAGGACGAGGAGAGGATCCAGTCAGCCCTGGATAATGAGGAAGCTATTCCTGGGAATGGTGACTGGGCTGTAAAGCTAGGAATCAATCTCTTTTATAGTGCAAATCTCAGCCGCTCTCCTCTTTATACTAAGCAGTTGCCTTACAATTCTGTTATATACTCTGCATTTGGTTGTCGCTCTCCAGCAAGCTCACCCATTGAGCCAAAGGTCTACCAAAGACAAGTTAGCAGACAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAGTCAGGTCCATCCCCTTTTAGCAAAAAGAGATTCTGAAGATGTTGAGGATGAGAAACTCTTTCTTGGGTTGATACTTACTGATGAGAAAATTGAGAGACCTGAAAGTGCTATCAAAAGTGAAATTACTTGCAGAAAATCAGGTAAGAAAAGGAAACAGATAGCGGGGAATGGACGAACTAAGAAAGGAAGTTATGGTAAGAAAATTCTAATTTCCAATAATTCCACTGAAGATAAACACAACTCACAGCCAAGGACTCTTAGAAGTAAGAAAGCCAGGCTTGTTGAGAGAGGCCATGCTGCTTTTGAAGGGGATTATTCTCCTCCATATCATCATAAAAAACCTGTAAGATACCAAACAAACTACACAGAAAGTGATGCAGTTTCTGATGATTCACTTGATGATGACGATGATAACACTCAGCATAGGAGGAATGTTAATGTTGAAAAAGCTAAATTTATTGATAATGATGTGGTTTCAAATGATACAGTGGACTATGATTCTGATTGGGAGCAGAGGGAAGAACTTGGAGGCAAGCAAGTGGAAGATACAGGGAAAAATTCATTTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCAGCTGCAAAGGAAGACTCCCAAAGGCAAGAATGCAAAATACGTTTGTGAAGAAGATAGAGTTTCTGATGACGAAATGGAGAGTTGTTTTCAAAAGCGGAAAGGGAGAATACCTAAAAGCATGCAAGGCAAATACCTTAATGGAAAAGATACAATAGCTGATGACCAACTAGAGATCAAAATGCAGAAGCCGCAATGGAGAAATTTTAAAAGCAGGCAAGTCAAATACCTCAATGAAGAGGCATCAGATGACCAATTAGAGGGCCATTATCGAAGGTATCAAAGAAGGAATTCTAAAGGCAGGCAGGTCAAATGTGTAGCAGGGGAAGATGAAATGTCTGATGAACAATTGGAGGATCATTGTCAGAAGCAGGAAACAAGTTTCTCTAGGAAAAGACAAACCAAAGGCATTGGTAGAGAAGTTAAAAATGAAATGTCTGATGACCAATTGGAGAATCATTTTCTGAAGCAGCAGAGAAGGTTTCCTAAGAGCAAGCAAAACAAACACAGTAATAAACAAGTTATGGATGACTTGGCTGAAAATAATTCTCATCTGCATAGAACTCCTAAAAGGAAGCAAGCTAAATGCGAGGATGAAGATGATATTAATTTAGATGATGAAATGGAGGATGATCAGCTGCTGAGGAGAAATTCAGATGATGAAATGGATGATCAGCAGCTGAGGAGAACTCTTCGAAGTAAACAGTCTAAACCAAAGACACTTCAACAGCTGAAACAAGCTAATTCCCTTCAAGTGAAAAACCAGGCATCTCGACCCATAAAACAGGGGTCTCGGATGCTGGTGAAATCAAAGGCTCCTCAGCAAATAAAACAGCCTGCTCATTTGCGGAATAAGCAATCTGATAACTCCCGCCAGTTTAGTTTACATATGGAAGACGAGGAAGAAGGTGGACCCAGCACTCGCCTTAGGAAGAGAGCCACAAAGAATCAGGAATCTGAAGGAACATTGAAAGAAAAGCAAACAAAAAGGAAGGTGAAGAATTCTACAGCTGCAAAGGTTTCAGTTAGCTTTACCAAAGTGAAGGATGGGGAAGCAGAGTATCAGTGTGATATAGATGGGTGCTCTATGAGTTTTGCATCAAAACAGGAGCTGCTGCATCATAAGAAAAATATCTGCCCTGTAAAAGGGTGTGGAAAGAAGTTTTTCTCACACAAGTATCTGGTGCAGCACCGTCGCGTTCATGAAGATGAACGCCCCTTGAAGTGTCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGCGTTCACACTGGTGCACGACCTTATGTATGTGCTGAGCCAAATTGTGGACAAACATTTAGATTTGTGTCTGATTTCAGTCGTCATAAACGAAAGACTGGTCATTCAGCAAAGAAGAGTCGTCAATAGCCAAGTGAAATAGATGTTTAATTGTTGTTTAACATGATATTTTATGAATTTGTGAATCATTGCCCAATTAACCGGCTAGGACTAGGGTTTAGCAACAGTTTAGGATATTCCTGCAATTGCCATTTGTAGTAACTGTTAATTACGTTTTCCCTTTGGGTTGTCAACCCAATTGTTTATTACAATTAAAGTAATTGCTTGGATCTTGAAACATGATTCACATCCAGTTCATATTACATGCAAATGTTGTT | 4983 | 0.4283 | MGLGSEGNGDVLPWLKSLPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSSKKTAIANLNRSLADVGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFSEFESKAKSFEKTYLKRHAKKGSGSGSGLGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHTGDPSSLADTPWNMRAVSRANGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFIGAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRFAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPAGVSAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGRGSAAVLLPRSSVDISVCSKLRVGSQQSINVSNSEGMHCSKGFVSDDLVFNRSHGIKQEKSFYSVKDKFTTLCERNRISSFDVNGNITISSSKPLQRDIERENCQGDGLSDQRLFSCVTCGILSFSCVAIVQPREPAARYLMSADCSFFNDWVVGWIKKNVQDVIHDVPVQSSQDALNTESAYGNTALALLASAYGNSSDSEEDMITVDRHESNEINSASESLLSNTQDSHASPMTALDRVDIPSKGASGEDFIHSRFDCSLSHHSIDHSFKKQDFNMVTFESSRMVPNSTSNYSQDAHDAERSLSNKCMVPFDNKNDSMMLQSDEDSSRMHVFCLEHAAEAEQQLRPIGGAHIFLLCHPDYPKIEAEAKMVAEDLGIDYMWKNIEYRHASKEDEERIQSALDNEEAIPGNGDWAVKLGINLFYSANLSRSPLYTKQLPYNSVIYSAFGCRSPASSPIEPKVYQRQVSRQKKVVAGKWCGKVWMSSQVHPLLAKRDSEDVEDEKLFLGLILTDEKIERPESAIKSEITCRKSGKKRKQIAGNGRTKKGSYGKKILISNNSTEDKHNSQPRTLRSKKARLVERGHAAFEGDYSPPYHHKKPVRYQTNYTESDAVSDDSLDDDDDNTQHRRNVNVEKAKFIDNDVVSNDTVDYDSDWEQREELGGKQVEDTGKNSFSEDSLDVGSLQLQRKTPKGKNAKYVCEEDRVSDDEMESCFQKRKGRIPKSMQGKYLNGKDTIADDQLEIKMQKPQWRNFKSRQVKYLNEEASDDQLEGHYRRYQRRNSKGRQVKCVAGEDEMSDEQLEDHCQKQETSFSRKRQTKGIGREVKNEMSDDQLENHFLKQQRRFPKSKQNKHSNKQVMDDLAENNSHLHRTPKRKQAKCEDEDDINLDDEMEDDQLLRRNSDDEMDDQQLRRTLRSKQSKPKTLQQLKQANSLQVKNQASRPIKQGSRMLVKSKAPQQIKQPAHLRNKQSDNSRQFSLHMEDEEEGGPSTRLRKRATKNQESEGTLKEKQTKRKVKNSTAAKVSVSFTKVKDGEAEYQCDIDGCSMSFASKQELLHHKKNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPNCGQTFRFVSDFSRHKRKTGHSAKKSRQ | 1574 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g00476 | 1574 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1541 | 1572 | IPR013087 | - | |
Pste2g00476 | 1574 | SUPERFAMILY | Clavaminate synthase-like | 107 | 369 | - | - | |
Pste2g00476 | 1574 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1513 | 1535 | IPR013087 | - | |
Pste2g00476 | 1574 | SMART | JmjN_1 | 20 | 61 | IPR003349 | - | |
Pste2g00476 | 1574 | SMART | cupin_9 | 182 | 351 | IPR003347 | - | |
Pste2g00476 | 1574 | Gene3D | Classic Zinc Finger | 1538 | 1567 | - | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1273 | 1303 | - | - | |
Pste2g00476 | 1574 | Gene3D | Classic Zinc Finger | 1428 | 1480 | - | - | |
Pste2g00476 | 1574 | SMART | c2h2final6 | 1511 | 1535 | IPR013087 | - | |
Pste2g00476 | 1574 | SMART | c2h2final6 | 1541 | 1567 | IPR013087 | - | |
Pste2g00476 | 1574 | SMART | c2h2final6 | 1481 | 1505 | IPR013087 | - | |
Pste2g00476 | 1574 | SMART | c2h2final6 | 1458 | 1480 | IPR013087 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1206 | 1262 | - | - | |
Pste2g00476 | 1574 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1481 | 1510 | IPR013087 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1340 | 1365 | - | - | |
Pste2g00476 | 1574 | ProSiteProfiles | JmjC domain profile. | 182 | 351 | IPR003347 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1396 | 1436 | - | - | |
Pste2g00476 | 1574 | FunFam | Probable lysine-specific demethylase ELF6 | 1538 | 1567 | - | - | |
Pste2g00476 | 1574 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1483 | 1505 | IPR013087 | - | |
Pste2g00476 | 1574 | Pfam | JmjC domain, hydroxylase | 215 | 333 | IPR003347 | - | |
Pste2g00476 | 1574 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1497 | 1539 | IPR036236 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1381 | 1395 | - | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1184 | 1438 | - | - | |
Pste2g00476 | 1574 | Gene3D | Classic Zinc Finger | 1481 | 1508 | - | - | |
Pste2g00476 | 1574 | Gene3D | Classic Zinc Finger | 1509 | 1537 | - | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1313 | 1335 | - | - | |
Pste2g00476 | 1574 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1543 | 1567 | IPR013087 | - | |
Pste2g00476 | 1574 | ProSiteProfiles | JmjN domain profile. | 21 | 62 | IPR003349 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1030 | 1049 | - | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 951 | 998 | - | - | |
Pste2g00476 | 1574 | Pfam | jmjN domain | 22 | 55 | IPR003349 | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1080 | 1099 | - | - | |
Pste2g00476 | 1574 | MobiDBLite | consensus disorder prediction | 1080 | 1094 | - | - | |
Pste2g00476 | 1574 | FunFam | Probable lysine-specific demethylase ELF6 | 14 | 355 | - | - | |
Pste2g00476 | 1574 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1529 | 1563 | IPR036236 | - | |
Pste2g00476 | 1574 | FunFam | Probable lysine-specific demethylase ELF6 | 1508 | 1537 | - | - | |
Pste2g00476 | 1574 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1454 | 1510 | IPR036236 | - | |
Pste2g00476 | 1574 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 13 | 1069 | - | - | |
Pste2g00476 | 1574 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1511 | 1540 | IPR013087 | - | |
Pste2g00476 | 1574 | Gene3D | Cupin | 14 | 355 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g00476 | Pste-Chr2 | 4368409 | 4378582 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g00476 | 1408 | 1572 | C2H2 Transcription Factor Family | AT3G48430 | 63.043 | 1.25e-66 | 244 |