Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00463 ATGCAGCGCACTTACGCAGTGTTACTGTTACCATTGTCCCAAACCTGAAACGAACAACAAAAAAAAAAAAACAACACAATACTCACTAAAATATTTCCGCGCTAGGGTTTCGAAAGAGAGCGATCACTAACCATGGCGATGGCTGCTGTTCTTCGTCGCGAAGGGAGGCGTTTGACCCAACCAATCACCGCTCTCCACTCCTCTCTCATCTCTCCAGACCACGCCCCCGATGGCGCACGCTCCATTTCCACTCAAATAGTGAGAAACCGAATGAAGAGTGTGAAGAATATCCAGAAGATCACCAAGGCTATGAAGATGGTTGCCGCATCCAAGCTGCGAGCCGTTCAAACAAGAGCTGAAAATTCGCGTGGCCTCTGGCAACCGTTTGCGGCTCTTCTCGGCGACAATCCCAGTGCTGATGTTAAGAAGAGCGTTGTTGTTACCATTTCTTCGGACAAAGGTCTTTGTGGTGGAATCAATTCCACGTCTGTCAAGATAAGCAGGGTTTTGCACAAATTGAATTCTGAGAAGGCTAAGGCTCAATTGTTGCGTGACTCAAAGAAAGACATTTTGCTCTCCCTTACTGAATTGCAGAAAAATCCACTGAATTATACTCAGGTGTCTGTCTTGGCAGATGACATTTTAAAGAATGTTGAGTATGATGCATTAAGGATTGTTTTCAACAAATTTCAGTCGGTTGTACAATTTTTGCCAACAGTGTCTACTGTATTGTCTCCTGAGGTTATTGAGAAAGAGGCTGAATCAGGAGGAGGAAAGCTTGGGGAACTGGATTCATATGAGATTGAAGGTGGCGAGACAAAATCTGAAATTCTTCAGAATCTGGCTGAGTTCCAGTTTTCTTGTGTGATGTACAATGCTGTGTTAGAGAATGCTTGCAGTGAGCAAGGAGCAAGAATGTCTGCAATGGACAGCTCTAGCAGGAACGCTGGGGATATGCTTGATCGTCTCACCCTCACCTATAACAGAACTCGTCAAGCATCAATCACCACTGAATTGATAGAGATTATCTCTGGAGCTTCAGCACTGGAAGGTTAATTTCAGGAGAGCAGTCTGTAATATATTCATCGGTGGCGATATTAAGATAATGTCGTTGGGCTCTTTTGAAATTGTTGGTGCCACATTTTTTTAATCTTAGACTTTTGTAATAATTATTCCAAGGTCAAACCCATTTTGGGGATTTCCTGTTTCAGACCAGATATTTCTGGAATTGTGTTTTTGATGTGAAGATGGAGTCTGTTTTCTTACGACTCGTCATAAGATTTTTCAGTTCCAATAACGATGAGCTTTCGTTTCTTATACAAATAAGAATTGTCACACTATTTTTTAACAGCAAGAATTGTTACAGTAGG 1370 0.4234 MAMAAVLRREGRRLTQPITALHSSLISPDHAPDGARSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFAALLGDNPSADVKKSVVVTISSDKGLCGGINSTSVKISRVLHKLNSEKAKAQLLRDSKKDILLSLTELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFQSVVQFLPTVSTVLSPEVIEKEAESGGGKLGELDSYEIEGGETKSEILQNLAEFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00463 307 Gene3D - 63 264 - -
Pste2g00463 307 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 302 - -
Pste2g00463 307 PRINTS ATP synthase gamma subunit signature 97 116 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 PRINTS ATP synthase gamma subunit signature 252 271 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 PRINTS ATP synthase gamma subunit signature 283 304 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 CDD F1-ATPase_gamma 39 302 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 Pfam ATP synthase 41 305 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 NCBIfam ATP synthase F1 subunit gamma 39 305 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 41 305 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 PANTHER ATP SYNTHASE GAMMA CHAIN 34 305 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste2g00463 307 PIRSF ATP_synthase_gamma 6 305 - -
Pste2g00463 307 FunFam ATP synthase subunit gamma 63 264 - -
Pste2g00463 307 ProSitePatterns ATP synthase gamma subunit signature. 291 304 IPR023632 -
Pste2g00463 307 FunFam ATP synthase gamma chain 260 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00463 Pste-Chr2 4229082 4236347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00463 43 305 Primary Pumps ATPases AT1G15700 29.781 4.75e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00463 2 4229082 4236347 Pste2g00463 2 4229082 4236347 ECH