Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g00447 | GGGAGACGCTGATTTCGAAATTGAAGGGTTTGCGAAATAGTGCTAAGTGTATGGTTTTGTTGCATTGCTGTGCTAATTGCTAAAACCTTGTAACTGTATTTGCTTTCTGGTTTCTCCTTCTGTACATGGCGGCTGCAGCAGTGGTGGAGGCGAGGAAGGCCCCACGGCCCGGAAAGGGCGGGTACGAAGCCCACGGCCTAAGCGAAGAAGAAGCCCGCGTTCGCGCAATCGCGGAGATCGTGAATTCCATGGTGGACCTCTCTCACAAAGGCCAGAACGTGGACCTGAACGCGCTCAAGTCCGCCGCGTGCCGCAAGTACGGTCTTTCACGCGCGCCCAAACTCGTCGAGATGATCGCCGCCCTCCCCGACGCCGAACGCGAGACGCTCCTCCCAAAGCTCCGCGCGAAGCCCGTCCGCACCGCCTCCGGAATCGCCGTCGTCGCCGTCATGTCCAAGCCTCATCGCTGCCCCCATATCGCCACCACCGGCAACATCTGCGTTTACTGCCCCGGGGGACCTGACTCGGACTTCGAGTACAGTACTCAGTCTTACACCGGTTACGAACCAACCAGCATGCGTGCGATTCGTGCCAGGTATAATCCGTATGTCCAAGCGAGGAGCAGGATAGATCAGCTTAAGCGTCTGGGTCATAGTGTAGATAAGGTTGAATTTATTTTAATGGGTGGTACCTTCATGTCACTACCAGCTGATTACCGTGATTATTTTATAAGAAATCTTCATGATGCTTTGTCTGGACACACGTCTGCCAATGTGGAAGAGGCAGTGGCTTACTCTGAGCACGGTGCAACCAAGTGTATTGGCATGACAATTGAAACGAGACCAGATTATTGTCTGGGGCCTCATTTGCGACAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTCCAGAGTACCTATGAGGATGTTGCTCGTGACACTAATAGAGGACATACTGTAGCTGCTGTAGCTGATTGCTTTTGCTTAGCTAAAGATGCTGGTTTTAAGGTTGTTGCTCACATGATGCCTGATCTTCCAAATGTTGGTGTTGAAAGGGACATGGAAAGTTTCCGGGAGTTTTTTGAGAGTCCCTTATTTAGAGCAGATGGTCTTAAAATATATCCTACACTTGTAATTCGTGGAACTGGGCTTTATGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAGCAACTTGTGGACATCATAGCAAGGATCCTTGCTATGGTACCTCCGTGGACACGTGTATATAGAGTTCAGCGTGATATTCCCATGCCTCTGGTTACCTCTGGGGTTGAGAAAGGCAATCTGAGGGAGCTAGCATTAGCTCGAATGGAAGACCTGGGACTGAAATGTCGCGATGTTCGGACCAGAGAAGCTGGAATCCAGGATATTCACCACCAAATTAAGCCGGAAGAGGTGGAGCTTGTTCGGCGTGATTATATGGCAAATGAGGGTTGGGAAACATTTCTATCATACGAAGATACACGTCAGGATATTCTTGTCGGTTTGTTAAGACTGCGGAAATGTGGCCGCAACACTACTTGTCCAGAGCTTATGGGGAAGTGCTCTATTGTTCGTGAACTCCACGTTTATGGAACTGCTGTACCAGTTCATGGACGGGATGCTGACAAGCTACAGCACCAGGGCTATGGCACACTTCTAATGGAGGAGGCAGAGCGCATTGCTCGCAGAGAACACAGATCAACAAAAATAGCTGTAATTTCAGGGGTTGGCACACGCCATTATTACAGGAAACTGGGATACGAGCTAGAAGGACCTTACATGGTGAAATATCTAGTGAAATAACATACTAGATGTTTCTTATGTAATTTTGTAGCATTAATTAATTATATGTTTTATATGCCAATCGCAAGACATTCGTTTGTGCAGAGATTCCCTAACGCCCTCTCCCCTCAATGCTTTCTCGGCTAGATTGGTTTCATAATTCTCTCGTTTTATTATGAGATTTAATAGATATATTTTTTTATACGTTC | 2008 | 0.4781 | MAAAAVVEARKAPRPGKGGYEAHGLSEEEARVRAIAEIVNSMVDLSHKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPDAERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLVK | 564 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g00447 | 564 | PIRSF | HAT_Elp3 | 20 | 563 | IPR034687 | - | |
Pste2g00447 | 564 | Pfam | Radical SAM superfamily | 123 | 311 | IPR007197 | GO:0003824|GO:0051536 | |
Pste2g00447 | 564 | NCBIfam | tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 | 50 | 562 | IPR034687 | - | |
Pste2g00447 | 564 | SFLD | ELP3-like | 53 | 562 | IPR034687 | - | |
Pste2g00447 | 564 | FunFam | Elongator complex protein 3 | 411 | 563 | - | - | |
Pste2g00447 | 564 | Pfam | Radical_SAM C-terminal domain | 329 | 408 | IPR032432 | - | |
Pste2g00447 | 564 | Pfam | Acetyltransferase (GNAT) family | 415 | 551 | IPR000182 | GO:0016747 | |
Pste2g00447 | 564 | PANTHER | HISTONE ACETYLTRANSFERASE-RELATED | 16 | 562 | IPR039661 | - | |
Pste2g00447 | 564 | SMART | MiaB | 105 | 367 | IPR006638 | GO:0003824|GO:0051536 | |
Pste2g00447 | 564 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 371 | 558 | IPR016181 | - | |
Pste2g00447 | 564 | SUPERFAMILY | Radical SAM enzymes | 135 | 374 | - | - | |
Pste2g00447 | 564 | CDD | Radical_SAM | 112 | 359 | - | - | |
Pste2g00447 | 564 | ProSiteProfiles | Radical SAM core domain profile. | 98 | 388 | IPR007197 | GO:0003824|GO:0051536 | |
Pste2g00447 | 564 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pste2g00447 | 564 | Gene3D | - | 414 | 563 | - | - | |
Pste2g00447 | 564 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 412 | 564 | IPR000182 | GO:0016747 | |
Pste2g00447 | 564 | SFLD | Radical SAM | 53 | 562 | IPR007197 | GO:0003824|GO:0051536 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Pste2g00447 | Radical_SAM | 2.3e-17 | CL0036 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste2g00447 | 2 | 4018512 | 4023586 | Pste2g00447 | 2 | 4018512 | 4023586 | ECH |