Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00445 ATGATGATGATGATGTCAAGCTCAAGAGAAGGTTATCAAGCCAAGCAAGAGGGTGACATCATTAATGTTGACAAATTTTCCAAGACATCTACCTCTTCAAGACAATGGTCAGCATTCAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTTGGAGGAAAAGATCGGCATAGCAAGGTGTGCACCATAAGAGGGCTGAGGGACAGAAGGATTAGGCTCTCAGTTCCCACAGCAATTCAGCTTTATGATCTTCAAGACAAACTTGGAGTGAGTCAACCAAGCAAAGTCATAGATTGGTTGCTTGAAGCCACTAAAGTTGACATTGACAAGCTCCCTCCACTTCAATTCCCTCAGGGTTTTGGTCAATTTCATCATCAATTCCCCTTTCATGATTCAAGTCCCTCTCAGCTTACTCTTGGACCCTTCTGTGATGCTAGTAACTCCACATTTGCAAGGGATGGGGAGATTCAAAACCTCATGGAAAAGTCAAGGTATTGGGACAATTTAGATTCATTATCAAGATTAAAAGGCAAGGAAATTGAAAAGGGCAAGTGGATCAAAACAAATGAGCAAGAAAATAATTATGAAGAGGGTGCTGCTGGAGGTTTCAACAGCATGCAAGTTTCCACTCAGAGGCTTTTCCCAATGGGTAGTAGTAGTGCTACCACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATTCCATGCCATATAACTCCTTCAATTCTGACCCTTCTACTTTGTCTTTATCCCAATTTGGAAGCCATGGTTTGTTCCCTTCCCAGCAAGTAGATCCTAGTCCAACCACTGGCAATGGTGTGCAATTCCCATCTTCTATGCCATTTCCTTCACCAGGTTCTCAACTACTGTTTGGTTCATCTTCTGCTACACCATCAATGTTCACTACCTATTCTCCATTTATTGCACCCCCAATGGACAACGATCCTAGACAGTTCAACCATATCCAGCTCTTGAACTCAGGTTCTCAAATCTTGCCTCACCCACTCATTCCATCTCTTCACTCATTCAGGCCCTTCCAAGCAGCACCCTTTAGTTCAAAGCTTTTGGATTCAGATAGCAACCGTCAACAAGATAAGGCTAGCAATTCTTGA 1113 0.4259 MMMMMSSSREGYQAKQEGDIINVDKFSKTSTSSRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGVSQPSKVIDWLLEATKVDIDKLPPLQFPQGFGQFHHQFPFHDSSPSQLTLGPFCDASNSTFARDGEIQNLMEKSRYWDNLDSLSRLKGKEIEKGKWIKTNEQENNYEEGAAGGFNSMQVSTQRLFPMGSSSATTTHSLLPGLLNNSMPYNSFNSDPSTLSLSQFGSHGLFPSQQVDPSPTTGNGVQFPSSMPFPSPGSQLLFGSSSATPSMFTTYSPFIAPPMDNDPRQFNHIQLLNSGSQILPHPLIPSLHSFRPFQAAPFSSKLLDSDSNRQQDKASNS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00445 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 286 IPR005333 GO:0003700
Pste2g00445 370 Pfam TCP family transcription factor 53 153 IPR017887 -
Pste2g00445 370 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00445 Pste-Chr2 3983301 3984413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00445 9 329 TCP Transcription Factor Family AT5G60970 40.533 1.13e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste2g00445 TCP 4.4e-25 No_clan