Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00439 GGAGTTTTCTGAAGTGTAGTGAAGATTGGGGTTTTGGTGTTGCTTTGTTGCTAGTTTGTATTGGAGAGATGTATAATCAAGTTAATCGTGGGTCTCATTTTGGGCAGAGTTCTGCTCCTCCGGTGCTGCCACCACCGCCGCCGCCGCTGCCACCGTATCAGCAGGCTCCACCGCATTTCCATCAATTCCCACCACCACCACCACCTCCTGGTCATGTGTATTTACCACCACCTCCACCTCCTCCTACCTCATCTTCCTCAGTTCCCATGAACCTTCCTCTACAAGGTTCGGTTAATGTGATGCCGAATGCAGGACAAACCTATGCTATCCCTTCTCAGTTGCAAACCATGGCGCCACAAACATCTTGGGCACCGGCTAGAGTATTGCCACCACCTCCTTGTTCTACCTCGGCTTCCCAAGGACAAATTTTGTATAACCCTCGTTTCCAATGTCCTCCTCCTATGCAGCCTGGTGGTGATGTTCAGAATCTGCATAATGCTCCTCCACTGCCACCACCACCTTCTGTGTATTTCCATTCAACCATTGGGAGTTACCAAGTGCCCTCTGCTGTTCCGCCGCCGTTGCCGCCGTCTCCTCCTCCTGCTATGCTGGCTCCTCCTCCTCCTCCACCACCACCCCCTGTTGCTCCTCCCTCGGCAAATGCTGCTGCGCATACTGATGATGCTCACTCTATGAAGGTTTCTGGCTTGGAATCAAAGTCTGTGGATTTGGTAGACAGAGTTGTAGAGTCTCGTCAATGTGGTGTTGTGCCTGTTGATGGTTCTGATTCTAATTGGGATGGTGCAAGTTGTAGAGAGTTTGCTGTTGTTGGCAGAGAGGAGGATGCTACGCCACCCAAGCCAACAGATGAAAAGACTGTGCAGAAGATTGAAGCTTTGTGTCAGCTTATTGCTGAGGAGGGTGCTGATATTGAAGATAGGATTCGTCAAGATGAATTTCAGAATCCTGAATACGCATTTTTGTTTGGTGGTGATCCAGGAACTGACGCTGAAGTTTCTCAAACTTATTTCCTGTGGATGAAGAAGAAATATAATATGGATACTGGATGGCATGAAAAAAAATTGGAATCACAGATAATGCACTCTTCAGGGAAACGGTATAATATGCATGTTGCAACTGTGAGTGCCGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAAGACCAAGGTTCAAATTATGCAACTGAAGCCCTAACTCAGCAACATAATCGGGATGATGAAGTGTTTAGTGCGAATCAGAATATACATAAACTGCAGAATTTGACAGAGAATGACCCTGGGAAGGACATTTCATCCTGCCGTGCGTCACACTTTGTATCTGTGGGTGCCAGCAAACAAAATGAAGGACCAGAGATTTTATCAAATTCGGAGCATGTGAAATCTATAAGATCAGTTACCAAGGTTTTTAGTCCAGTGAATGACTCCACTGAAATGCCTGGATCACCCCCGAGTGCAGCTTTGGAAAGATCTGCAGCTCCTGTAGACAAGAATTTCATGCGTACTGGTACTTCTGATTGCAATGAAACCATCACTACTGATAGAGATTATGGGCTACTCATAAGGAGTGGCAGTCCAATAAGACTTCTTCAAGATTATGCTTCGGATGATACATCAGATAATGAAGATGAAGGCAATGCTGCAGAGGCTAATGTTTTAACAGCCTCAGGAGGTGCTGACACTGGTGTTTCAGCTGCTCATAATGACTCTGGGAGTTATTTGGAAACTGATATTGGATCTAAGAATCTCTCTGGAACCCAAAAGCACTCCAGAACATCACCAGATGATTTAGAAATATCTCCACATTTATTACAAGAGTCTAAGGAAACCCATGAGTGTAAAAAACCTGTCTCACGTTGGACTAGTGATGGATGTATTGAACATAACCTTGAAAATCAGGTGTCTGTTAATTGTGCTCCTTCAGTAGAAGTTCTCAAGGACAAAGATGAATTAGAGGGTAATGGCATTGACTGTGGTAGTAAAAGTGGTAATGCTGAAAAGGAAAATGAGGGGAAAACCTCAAAGTTTGAATCAAATGTTCTGCAAGTAGATGAATTTGGAAGACATCTAAGAGAAGGCGTTACAGATAGTGACTCTGATGATTCACGCTATCATCGGATGAGGAGACTAAACAAAAGAGATAGAAGCTGGAGTCGTAGCCGGTCTCCTCCAGAGAGGAGGAGTAGGAGGAATAGGAGGAGCCCCCGGAGGAGACGGGATAAAAGAAACAGGTCTCGCAGCTGGTCCCCCCGGCACCGAAGAAGCAGGAGTAGGTCTCCAATCCCAAGACGTTCAGGTGAGTTTCGTGGCGAGAATGTGAAAAGGGACAAGAATCAATGCTTGGATTTCCTTCGAGGAAAGTGCTATCGAGGAGCATCTTGCAAATACATTCACCATGAATCTGACATGAATGCTACTTCAAGGCGTTATAGGAATAAACATGATATGGAAGTCAGTTCTCAGGCAAAAGAATCTAAGATTAGTGGAGACAAGAAGAATGCTTCTTCTAAAGTGTTGGATAGTGAGCTTGGTGGAGTTAGAAGTCAGGATGTGAATCTCAGCCAGAATGTAACTAGCCGGGAAGTATTGCAGAAAAAAGAAGATTCAGGGAGGCTTGCTGTTGCATCAATTACCTTACATCTTGATGGTCAATCAGATACTGGCAATCCAAGTAAATCTGAATTTATCAGAGAGGTTGTTCCTGAAATTCAGGAAACCATAGTGGTAAGAGAGGAGCCTAAAACTTTAGTCCATGAAAATGATGGTTTCAAAGCAGGGGATTCGCAACAGCAATTTCACCCTGAAGCTTTAGGCAGTGGTGATACTTCTAAACCATCTGGTACATATAAAGATCTCATTCCCTCAGAAGATGTTTCTGCAGTTGGAGTTCCAGATCATTCTGGTTTCCCATCTCAGCATGTGAATGCATCACCTGATAAAAGATCAGTTGTTTCTTCTATTGTTAATGAAGTTCCTGGTAGTGAACCTTTACCATATATGTTATCATCAACTCAGCTACAGTCAGCCACTGGTTCTGTTGGGCAATGTGTCACATCCGATCAGCCTTCATTGCACTCTCAGGCTTCTAAAGAGTTACCTCCACTGAGTGGTTCTTTAGTGGAATTACCGCTTCATACTTACCAGTTGCCTGTGTCTGTTGTTTCACATTCCCAGGGTGAAAATCCTTTTCATATGCCACAAATTTCAAGGCAATATGGTGCAATGCAACAAAGTGCATTCTTTCCTTTCCAAGCCACCACTACCAGAGAAAATTTTGGACCTTACCCAGCTCCATTACACACACAGAACGCTCATTTCAATGTACCACCAAATAGTTCTTGGACATCCTTGCCACTGCCACCCCCACCACCGCCACCATCAAGAGTGATGTATAATTCCAGTTTAAACTCAGGAAATGTAAAATCATATATTTCTGCTGAATTTAATCAGAGTCAATTGCATTCAAGAACTAATTTTGTTTCTGAGACTTCAGGGAAGCCTGGGCTACCAACTAGTTCTCAGAATTCTGAATTTCAGGATCAAGCATACCCTCCAATGCAGGATCATCCACATTCTTTTATGCTTACAGAACCTTTCTCTCCAAAGCATCTCTCTCAGGGGAACCCAGCTAGTCAATTGCTTTCAGGCTCTAATGTTAACAGAGATGACTTTCAAAATCAACTTTCAATGCAGGATTCAAAATTTTCAAGTGTCAAATCTTTTGGCAGCTTGCAGCCTCAACCAAATCAATTTTCCTGGAAGTTGGATGTGAACAGACTACAACCTTCTCTGAGTGGCCAGTTGCCTCCTGAAGGACATTTGATGACTTCTTCCCACGTTGATTCATTATCACAGAAGCAACAATCATTGTATAGTTTTCAATCTTCTGTATCTGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTTTTCCTTCTTTTGGGGGATCAAGAATATCTGCTCACTATAATCCATATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAACTATTTTTAGACAGGAAAATGAAATAATCCATTCTTCTAGATTAAATCATACTCCTGTGAATGGGGAAGGTGAGGGTGGGGTTGGATCAAGACAGTCAGCATCCTCATCAAAATCAGCTAGAGCACTTGGTCAGATTTTACCTAGGTCTGGTGGTGACCAATATGACCCACTTTTTGATAGCATTGAACCATCAGCCTCTTTAAGAAAAAGTGGTTTTGATCAGAAACAGGAAGTTACTGGTGAATCAAACTTCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGATGAGGATGAGGATGAGAAGAACAAGCACGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACGGCAGATGCAGAAGTTGGTGCTGTTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAAATGACTACAGGGGAGATTGAAATTAATCAGGTCAAGTCTCCAGGGAAAAGAAAAAAGGGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCCATTGCCAACTTTGTAAAGGAGGTTTTGAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTGGCTTTCAAGACCATTGTGAAAAAGACTGTGGATAAAGTTTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCCCAAGAGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAATATGCAAATGTTTCCCCAACATTCAATGTCTATAGGTACGCATTTCAACGGGAAAAATCGGTGCTTCCCTGGAGTTGTCTTGTCTCAATTAAAGGCGTACTGCATAGGTGCAGAATGGTTGATCAACATTCCTGTTCCTGAAGAAGTTTTGGTCGTCCGCAAT 5006 0.4319 MYNQVNRGSHFGQSSAPPVLPPPPPPLPPYQQAPPHFHQFPPPPPPPGHVYLPPPPPPPTSSSSVPMNLPLQGSVNVMPNAGQTYAIPSQLQTMAPQTSWAPARVLPPPPCSTSASQGQILYNPRFQCPPPMQPGGDVQNLHNAPPLPPPPSVYFHSTIGSYQVPSAVPPPLPPSPPPAMLAPPPPPPPPPVAPPSANAAAHTDDAHSMKVSGLESKSVDLVDRVVESRQCGVVPVDGSDSNWDGASCREFAVVGREEDATPPKPTDEKTVQKIEALCQLIAEEGADIEDRIRQDEFQNPEYAFLFGGDPGTDAEVSQTYFLWMKKKYNMDTGWHEKKLESQIMHSSGKRYNMHVATVSADSDMEMEDDITLSDKDQGSNYATEALTQQHNRDDEVFSANQNIHKLQNLTENDPGKDISSCRASHFVSVGASKQNEGPEILSNSEHVKSIRSVTKVFSPVNDSTEMPGSPPSAALERSAAPVDKNFMRTGTSDCNETITTDRDYGLLIRSGSPIRLLQDYASDDTSDNEDEGNAAEANVLTASGGADTGVSAAHNDSGSYLETDIGSKNLSGTQKHSRTSPDDLEISPHLLQESKETHECKKPVSRWTSDGCIEHNLENQVSVNCAPSVEVLKDKDELEGNGIDCGSKSGNAEKENEGKTSKFESNVLQVDEFGRHLREGVTDSDSDDSRYHRMRRLNKRDRSWSRSRSPPERRSRRNRRSPRRRRDKRNRSRSWSPRHRRSRSRSPIPRRSGEFRGENVKRDKNQCLDFLRGKCYRGASCKYIHHESDMNATSRRYRNKHDMEVSSQAKESKISGDKKNASSKVLDSELGGVRSQDVNLSQNVTSREVLQKKEDSGRLAVASITLHLDGQSDTGNPSKSEFIREVVPEIQETIVVREEPKTLVHENDGFKAGDSQQQFHPEALGSGDTSKPSGTYKDLIPSEDVSAVGVPDHSGFPSQHVNASPDKRSVVSSIVNEVPGSEPLPYMLSSTQLQSATGSVGQCVTSDQPSLHSQASKELPPLSGSLVELPLHTYQLPVSVVSHSQGENPFHMPQISRQYGAMQQSAFFPFQATTTRENFGPYPAPLHTQNAHFNVPPNSSWTSLPLPPPPPPPSRVMYNSSLNSGNVKSYISAEFNQSQLHSRTNFVSETSGKPGLPTSSQNSEFQDQAYPPMQDHPHSFMLTEPFSPKHLSQGNPASQLLSGSNVNRDDFQNQLSMQDSKFSSVKSFGSLQPQPNQFSWKLDVNRLQPSLSGQLPPEGHLMTSSHVDSLSQKQQSLYSFQSSVSEANLGVPGETATVSRYPPDFLDSNHSTSFPSFGGSRISAHYNPYASTFEKPLSSKFSSTIFRQENEIIHSSRLNHTPVNGEGEGGVGSRQSASSSKSARALGQILPRSGGDQYDPLFDSIEPSASLRKSGFDQKQEVTGESNFSLRPKSSYMSLDEDEDEKNKHEVGAVASTTSQNNDEYGETADAEVGAVENESLSDDVDVAKMTTGEIEINQVKSPGKRKKGKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQEKISQYIDSSQRKLTKLVMGYVDNMQMFPQHSMSIGTHFNGKNRCFPGVVLSQLKAYCIGAEWLINIPVPEEVLVVRN 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00439 1646 MobiDBLite consensus disorder prediction 907 968 - -
Pste2g00439 1646 ProSiteProfiles Zinc finger C3H1-type profile. 761 788 IPR000571 GO:0046872
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1142 1207 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 911 936 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 791 830 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 546 586 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 638 666 - -
Pste2g00439 1646 SUPERFAMILY Surp module (SWAP domain) 260 325 IPR035967 GO:0003723|GO:0006396
Pste2g00439 1646 Gene3D - 761 815 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1142 1169 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 546 577 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 131 208 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 16 64 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1411 1434 - -
Pste2g00439 1646 PRINTS Proline rich extensin signature 42 58 - -
Pste2g00439 1646 PRINTS Proline rich extensin signature 13 34 - -
Pste2g00439 1646 PRINTS Proline rich extensin signature 169 194 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 791 824 - -
Pste2g00439 1646 Gene3D Surp module 248 332 IPR035967 GO:0003723|GO:0006396
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1353 1385 - -
Pste2g00439 1646 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1023 1592 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1436 1451 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1371 1385 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 166 196 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 699 757 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1 70 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 712 746 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1186 1207 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1452 1466 - -
Pste2g00439 1646 MobiDBLite consensus disorder prediction 1411 1466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00439 Pste-Chr2 3896748 3904398 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste2g00439 None None None