Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00415 GAAGGAAATCCTCTGTTACAAATTGTTTTCCATTAATGAATAAACTTTATGTGTCTGGGCCACAAGAAGAACAGACAAGTGTGAACCTTCCACAGCCTCCGTCCAAACGTGCCTCTCCCTCCTCCGTCACAGCCCCTCTCCCTCACCGACTACGCTCTCTCCCTCATCCCACCCGCCGCCGTCTCAACCGGCACATCCGCCCTCATAGACGCCGCCACCGACAGCCGTGTATCCTACTCCGTCTTCCTTGGGCAAGTCAAATCCTTGACCTCTTCCCTCCAGTCCCTCACCCCTCTCTCGAAAGGCCACGTGGCACTCATCCTCACCCCATCTACCCTGCACGTCCCCGTACTCTACTTCTCCCTCATCTCCCTCGGCGTCACCATCGCCCCCGTCAACCCCTAAGTTCCCAATCCGAGTTGACTCACCTCGTCCAACTCACCAAGCCCGCCATCGCCTTCGCCACCTCCACCGCCGCCCGCAACATTCCCTCCCTCAAATTCGGCACCATCCTCTTCGATTCCCCTCTCTTCCTCTCCATGCTCCACTCCAACAACATCAACACACACACAGTTCAGGTGACTCAGTCAGACACCGCCGCGATTCTCTTCTCCTCCGGCACCACGGGGCGCGTGAAGGGCGTCGAGCTCACGCACCGCAACTTCATAGCGCTGATTGGGGGCTTTCACTACCTCAGGAACACGGTGGCCAGTAATGTAGAGGAACCAAACCCGGTGTCGCTCTTTACCCTGCCGCTATTCCACGTGTTTGGATTCTTCATGATGGTGAGGGCCATAGCCATGGGGGAGACACTCGTGCTCATGCAAAGGTTCGATTTCCAACACATGCTCAAGGCCGTACAGAGGTATAAAATCACCTACATGCCCGTCTCGCCGCCGCTCATTCTCGCGCTAGCCAAGTCAGAACTCGTCAAAAATTACGACCTCAGCTCGCTCCGCTTTCTCGGTAGCGGCGGCGCGCCGCTCGGCAAGGACCTCGCCCACCACTTCAAAGCCAAATTCCCCAACGTCGACATTGCCCAGGGCTATGGTCTGACTGAGAGTGGAGGAGGAGCAGCTAGAACATTGGGGCCTGAGGAGAATCTGCGCCATGGTTCTGTGGGTCGTCTAGCAGAAAATATGGAGGCTAAGATAATGGACCCTGTAACTGGGGAGGCATTAGGTCCTGGCCAAAAGGGGGAGCTCTGGTTGCGAGGTCCAACAATCATGAAAGGTTATATGGGAGATGAGAAGGCAACAGCTGAAACGTTAGATTCAGAGGGATGGCTGAAGACTGGTGATCTTTGTTATTTTGACTCCGAGGGTTTCCTCTACATTGTAGATAGACTGAAGGAGTTGATCAAATACAAAGCATATCAGGTTCCCCCAGCTGAATTGGAACACATACTTCACGCCAATCCTGAAATTGCAGATGCTGCAGTAGTTCCTTATCCTGATGAAAATGCAGGACAAATTCCAATGGCCTATATAGTACGAAAACCTGGAAGCAACATCACTGAAGATCAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCTCCATACAAGAAGATCCGACGTGTTTCTTTTATCAAATCTATTCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCCAGTGGTTCATCCAAATTGTGATCTTGAAAAGCATGTGCTACATTTTCTCTTGGGATTTTATCATAAAATTTCATCAATCTCAAATTAACAAGATC 1750 0.5143 MNKLYVSGPQEEQTSVNLPQPPSKRASPSSVTAPLPHRLRSLPHPTRRRLNRHIRPHRRRHRQPCILLRLPWASQILDLFPPVPHPSLERPRGTHPHPIYPARPRTLLLPHLPRRHHRPRQPLSSQSELTHLVQLTKPAIAFATSTAARNIPSLKFGTILFDSPLFLSMLHSNNINTHTVQVTQSDTAAILFSSGTTGRVKGVELTHRNFIALIGGFHYLRNTVASNVEEPNPVSLFTLPLFHVFGFFMMVRAIAMGETLVLMQRFDFQHMLKAVQRYKITYMPVSPPLILALAKSELVKNYDLSSLRFLGSGGAPLGKDLAHHFKAKFPNVDIAQGYGLTESGGGAARTLGPEENLRHGSVGRLAENMEAKIMDPVTGEALGPGQKGELWLRGPTIMKGYMGDEKATAETLDSEGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVPPAELEHILHANPEIADAAVVPYPDENAGQIPMAYIVRKPGSNITEDQVMEFVAKQVSPYKKIRRVSFIKSIPKSPAGKILRRELVDYALSSGSSKL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00415 546 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Pste2g00415 546 CDD 4CL 122 534 - -
Pste2g00415 546 Gene3D - 116 439 IPR042099 -
Pste2g00415 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Pste2g00415 546 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Pste2g00415 546 MobiDBLite consensus disorder prediction 1 59 - -
Pste2g00415 546 SUPERFAMILY Acetyl-CoA synthetase-like 119 539 - -
Pste2g00415 546 MobiDBLite consensus disorder prediction 41 59 - -
Pste2g00415 546 Gene3D - 440 540 IPR045851 -
Pste2g00415 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 121 536 - -
Pste2g00415 546 MobiDBLite consensus disorder prediction 1 30 - -
Pste2g00415 546 Pfam AMP-binding enzyme 119 444 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00415 Pste-Chr2 3610287 3615139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00415 119 546 Monolignol Biosynthesis Gene Families AT5G63380 66.744 0.0 593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00415 2 3610287 3615139 Pste2g00415 2 3610287 3615139 ECH