Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00408 ATCTGTAAAGAGTTGAATTAGAAACCAATGATAGCTTGGTAGGATGTGGTGTCTGTATATGAACTTTAGCTGAAAAAGTATCATAGGTTGATACTTGGTTCTTCTCTTTATAACACTTCATTTTCCTCCTTTTCTTTCAGAAGAACCTTTCTCATTACCCTTTTCCTCTGCCACCCCTTTATTGCTATTTGGTGGAGAGAGCACACTAGGAAAGAGCACCATGTGGAAGAAGTAAATGCATTAACGTCAGGTTTTTCATTGGATTCTTTGTATGACCAAGTCGCTCCTACTCCTTGAAGCACTGCAAATAGAAGTGTAGAACTTTGCTGATGGGGTTTCGTGACTTGGTTTTGCTCTTCTGTTCTGCTTGGTGTGTCTTTTATGTTGGTAGTTCCAGTGCACAGTTGCAATCCTCTCAAACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAGACAGTTAGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTGGGCAAGTGAATGTCACATGCGAGTACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGATTTGCCATTCCATATCAAACACTATCTGGAAGCTTCTCCATGGACTCTTTTGTGGCTACTCTTGCAAGGTTAACTAGCCTGAGAGTCCTTAGTCTTGTTTCGTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTTTATACAATTGAACATTTGGACTTAAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGCGAACCTGCAAACTCTTAGATTGGGTGATAATTTCTTCAATGGTACAATCCCAAGCTTGTTCAATTCATCAAGTAATCTCACAGTTGTTAGTCTGAAGAATAACAAGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGCGTCACCACTTTAACTGACATTGACATGTCAATCAATCAAATATCAGGGAGCTTGCAAGATTTTACTGATTTGAGCAGCTTGGAACAGCTAGATTTAAGGGAAAACAGGTTAGAGTCTACACTACCTGCAATGCCAAAAGGGTTGATAAGTCTTTTCCTCAGCAGAAACTCTTTCTCTGGAGAAATTCCCAAGCACTATGGCCAACTAAATAGGCTTCAGAAGCTTGATGTTTCCTTCAATGCACTCACAGGCACAGCTCCTGCTGAACTTTTCTCTTTGCCAAACATCAGTTACCTGAATTTGGCATCCAACATGTTGAATGGACCACTTCCAAATCACCTAAGATGTAGCAACCAACTTAGATTTGTTGACATATCATACAATAGATTTGTGGGGGACTTGCCTTCTTCGCTGAGCACTAAATCAGAAAATACAATTGTTAAGAGTGATGGAAACTGCTTATCAAGGAGTGTGCCGCATCAGCGTGCAGTATCCTACTGCACAGAACCTCAAGTGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTATCATTGTAGGAATTCTTGTAATCATTGCTTTGACCATTGTTATAACTTGTAAAAGGTATTTCCATTGGGGGGTATCAGAGCAGCACCTATTGCATAAAACAGTTCGAGATAGCTATCCAGTGGGGTTCTCCTCCGAGTTTGTCACAAATGCAAGGTATCTTTCTGAAGCTGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTCGGCCATATTCCTTGGAAGAGATAAAGGAAGCCACAAATAACTTTCAAAACTCTAATTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGGAGAGTGGTATACAGGTTGTAATAAGGTCCTTGCCTTTGTCAAAGAAGTATTCAATTAGGAATTTCAAACTGAGATTGGATTTGCTTGCAAAGCTGCGTCACCCGCATTTGGTAACCCTCCTGGGGCACTGCATTGATGGTGTTGTAGGAGAGAATAACGAGACAAATGTCTTTCTCATTTATGAATATGTGTCCAATGGGACTTTCCAGACCTATCTTTCTGGAGATAGTTCTGGCAAGGTTTTCAATTGGTCAGAGCGATTAGCAGTACTACTAAACATAGCTAAGGCTGTCCACTTCCTACATACTGGCATGATACCTGGTTTCCTCAAAAATCGACTTAAGACTAACAATATCTTGCTGCATGATAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAACTGATGCTTGTGGGGTACAAGGAGAAAGTCCTAATTCATGGCAAATGAAAATGCTACAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTACTGTATCAGCTAAAAGAGAAGCAAATGTGCTGAATGTAATGGCATCTTTCAATAGTCAGGATGGCTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCTAAAGAATCTCTATTTGTTGTGATTTCCATAACGAACAAATGTATATCTCAAGAGTCATGGAGCCGACCATCCATTGAGGATGTCCTTTGGAACCTGCAGTATGCTTCTCAAACACAGGCAACAGCTGATGGGGATCAGAGAATTTGATACTCCAATAAATCAGTGACAGTAACGTCTTGAGTTTTGCTTCAAACTACTCCAAAAGATAGCAACCATTTCATCTTTTGGATTGCTTAGAAGGGTAGGAAAGAATTGGATCCATTCACCAATTCGGTCAATTTTCATGCAGCAAGTACTTCATCTGTACAGTATTATTACTATATTATTGTTATTATTGTAAGGTTATTTATAGTCCTCTTAACTCTTTGTGGAACAAACTTACGCACCCTGACCACTTCACTAGGTAGTCTTAAATTGATGGAATTGGAAGAGAAAG 2895 0.4017 MGFRDLVLLFCSAWCVFYVGSSSAQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSISSGQVNVTCEYNFVTELSILGDKPTKGRDFDGFAIPYQTLSGSFSMDSFVATLARLTSLRVLSLVSLGMWGPLPDRIHRLYTIEHLDLSSNYLYGSIPPKICTMANLQTLRLGDNFFNGTIPSLFNSSSNLTVVSLKNNKLKGPFPPSILSVTTLTDIDMSINQISGSLQDFTDLSSLEQLDLRENRLESTLPAMPKGLISLFLSRNSFSGEIPKHYGQLNRLQKLDVSFNALTGTAPAELFSLPNISYLNLASNMLNGPLPNHLRCSNQLRFVDISYNRFVGDLPSSLSTKSENTIVKSDGNCLSRSVPHQRAVSYCTEPQVKKKSYRVGIFVGIIVGILVIIALTIVITCKRYFHWGVSEQHLLHKTVRDSYPVGFSSEFVTNARYLSEAAKLGREDLPTCRPYSLEEIKEATNNFQNSNFMGENIYGKLYRGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVTLLGHCIDGVVGENNETNVFLIYEYVSNGTFQTYLSGDSSGKVFNWSERLAVLLNIAKAVHFLHTGMIPGFLKNRLKTNNILLHDNWMAKLSDYGLSIISEETDACGVQGESPNSWQMKMLQDDVYSFGFILLEALVGPTVSAKREANVLNVMASFNSQDGWKQIVDPVVQATCSKESLFVVISITNKCISQESWSRPSIEDVLWNLQYASQTQATADGDQRI 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00408 758 Gene3D Ribonuclease Inhibitor 259 392 IPR032675 -
Pste2g00408 758 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Pste2g00408 758 Gene3D Phosphorylase Kinase; domain 1 444 560 - -
Pste2g00408 758 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 441 560 - -
Pste2g00408 758 SUPERFAMILY L domain-like 65 371 - -
Pste2g00408 758 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 758 - -
Pste2g00408 758 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Pste2g00408 758 SUPERFAMILY Protein kinase-like (PK-like) 461 743 IPR011009 -
Pste2g00408 758 Gene3D Transferase(Phosphotransferase) domain 1 561 757 - -
Pste2g00408 758 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
Pste2g00408 758 ProSiteProfiles Protein kinase domain profile. 478 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00408 758 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 108 739 - -
Pste2g00408 758 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 257 - -
Pste2g00408 758 Pfam Protein tyrosine and serine/threonine kinase 482 739 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00408 Pste-Chr2 3551518 3556817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00408 6 690 Miscellaneous Gene Families AT5G14210 48.511 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pste2g00408 PK_Tyr_Ser-Thr 2.3e-21 CL0016