Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00398 GTTTCTCTCTTCTTCCTTTCTTTCTCTCTTCTTCTTCTTGTGTGTGTGTCTGTCGTTGAAGCCAAAACCAAACGAGAAGAAGAATACGAAGAAGAACAACCATGGTTTCAACCAGACGCAACAGTGGATCTTTCTCAAACGGCAACAAGAGACCTTCTTCTTCTGAAGACAAGACTCCGTCGCCTTCACCCAAGCGCCAAAAGGTCGACAATGGTGCTGCCTCGTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGCACGCCAGACCCACCCGCTGATCCCGGAGAATGTGGCCATCAGGACGCTCAGATCGCCGGCGCCGCCAGTCCCGACGGCAAACCCGACTCCACGCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTGGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGAGTATATATCAGAAGCAAACCCCAAATTTCGAAGCTTCAGTTCCTTGGGGCAGACTCTTGTCTCAGTCTGCTCAGAATCCGAATGTTTTAATTTGCGCACCCAACTTTACTATTGGGTCTAGTAGAGGTTGTAATTTTCCGTTGAAGGATCAGACTATAAGTGGGAATTTGTGCAAGATCAAGCATACACAGGCTTGTGCTTGTATGATTACTGTTGTTTCTGGAAATGATCAGCGCGAGGGAAGTGTCGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGGACTCTCGTCAAGAAGAGTACCAGCTGCGTGCTTAACTCTGGGGACGAGGTGGTTTTTGGTTTGCTGGGGAATCATTGTTATATTTTTCAGCAAATAAGTCCCGAAGTTGCAGTTAAGGCTGCAGAAATTCAGAGTGGTGTTGGCAAGTTTTTTCAGATTGAGAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGTGCTTCTATTTTGGCTTCTCTTTCTAGCCTCAAACCAGATCTTACAAGATGGAAATCTCCATCTCAGACTGCCAATAAACCTCAGCAAGGTAGTGACATTCCTAGTCATTCTGCTCTCCCTGATGGTACAGAAACTGCACTTGATGGCCTGGAAGGCAACTCAGCTCCAAATGTAGCGACTGATAAAGCTTCAGATGTTGGAGCAAGCGACAATAATTCACTTATGGATTGTGATCCAGATGATGCAGGCGCCGAGGCAGGCAATGTAAAATTTTCTGGGGTGAATGCTTTCATAGGGCCTTTCTTGAGGATTCTAGCTGGATCTACTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTTGAAGAAAGAAATGGAACGAGGGATGCGCAAGCTGCATCGACTTCTGGTACTTCCGTACGCTGTGCTGTTTTTAAAGAAGATGTCCATGGTGCAATACTGGATGGGAAAGATATAGAAGTGTCTTTTGACAACTTCTCGTACTACTTAAGCGAGAATACAAAAAATGTCCTAATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCGAAGTACACTACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCACTTTTGGGTGGTTTATCTTCCAAAGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGATAAATCCTGTGGCAGTGCTAAACAAAGTCCCACAGCCACAGACTTGGCCAGGAGCATGGATCCATCAGCTTGTGAACCAGATACACCTAACTCCTCAAATGCCCCTACTCTATACGGCTTTGATTCTCAACCTAAGTTGGAAGCTGATAATGTACCATCTACCTCTGGGACAACTAAAAATTGTGTGTTTAAACTGGGTGACAGGATAAAATACAGTTCATCTTCTAGTGGCTTGTATCAGCTTCAGACAATTTCTTCAAGCAACGCCAATCGCATATTCAGGGGTCCAGCAAATGGAAGTCGGGGGAAGGTTGTCTTAGTTTTTGATGACAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGAGGTTGCTGTGAAAGTGGTCAAGGATATTTCTGCAATGTAAGTGATCTTCGATTGGAAAACAGTGGCATTGAAGAACTCGACAAATTACTCATTAATACATTATTTGAGGTTGTGGCTAGTGAAAGCAGAAATGTACCATTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCATTTTCATTTAGAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTGGTAATAGGTTCGCACACCCACACTGACAGTAGAAAGGAGAAGTCACATCCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCTGTCTTCTGTGACAAAGTGGGGACTGGGGCTGTAGCATATAATAGATGGGTTTTGAGCCGTTGTGGGATGGAATGTGAAGGACTTGAGACGTTGTCCATTAAAGATCATACACTTACTATTGAAAATGCAGAGAAGATAGTTGGTTGGGCTTTAAGCCACCATCTCATGCAGAATGCTGAGAATGATCCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGCATGGGATTGGGATTTTACAGGCTATCCAGAATGAGTCCAAAAGCCTGAAGAAATCTCTTAAGGATGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCCCCTAATGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCTGAGTTATTTTGCAAAGGGCAATTAACTAAGCCGTGCAAGGGCATCCTATTATTTGGTCCCCCTGGAACTGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGTATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGTGTGATATTTGTTGATGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAACATGAGGCCATGCGAAAGATGAAAAATGAGTTCATGGTGAACTGGGATGGCTTACGCACAAAGGATACTGAACGAGTTCTTGTGCTTGCAGCCACTAATAGACCTTTTGACCTGGATGAGGCTGTCATACGGAGGCTGCCTCGAAGATTAATGGTAAATTTGCCAGATGCTCCTAACAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAGGACTTGTCTTCTGATATTGATATGGATGCAATTGCTAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACAGGCTGCTGCTCTGGCAGAAGGTAGACCTGCTCCAGCATTAAGTGGAAGCGCAGATATCCGATCTTTAAACATGGGAGATTTCAAATCTGCTCATCAACAGGTCTGTGCAAGTGTTTCCTCCGAATCTGTAAATATGACCGAGCTTCAGCAATGGAATGAACTATATGGTGAAGGCGGTTCAAGAGTGAAAAAAGCACTGAGCTATTTCATGTGAGCAAGCAAGCCCTATGTACAAATGTTCACCCATTGCTACCCCCATGTTCAGAAGCCTGCGTATTTGTAGTTTTGTGCCGGCCTTATAATACTTGCAGGGCTTGATGCTGAGCTATTTCGTCTATAAAATGAAATATAGGTTTTTTGAGTACCTTCTTTAAACCCTTACCTGTGGGATGGTGGATTTTGAAAGGAGTGGAGCCTTATAGAATTTTGGGCTGGCTCTGCTGCATCTATTTTGTTCCTCATCCCCTGGCCGCCACCAAAGAAAGATGTGTGTTGAAAGTGTACCAGAAAAAGAAGAGTCATAATATGACACGTGAAAGCATTTATCGCCCCTCCTAATGGAATATGCTAAAACAATAAGCGTTTAGATCATCCGTGCTTTCTATTTTATGTACATAATGCATGATAGAGCTCCCTTTAGTTGATTTTCCTTAAAGAATGCAAATCAATGAAAAATTTGTTGAACTTGTATGGTGGGTTCAATTCTTTCAATATTCACTACAAATCTTTATTCGATCCCTTTTTATGTAGGCTATGCTTTAACAGCATCAAACATGCAATGAATAGATGCGTTGTCTGAG 4317 0.4299 MVSTRRNSGSFSNGNKRPSSSEDKTPSPSPKRQKVDNGAASSEKPMPPAENSKDLGTPDPPADPGECGHQDAQIAGAASPDGKPDSTPPIADGSTPTVVADKPRGSFSSWSIYQKQTPNFEASVPWGRLLSQSAQNPNVLICAPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQACACMITVVSGNDQREGSVVAVLESTGSKGSVVVNGTLVKKSTSCVLNSGDEVVFGLLGNHCYIFQQISPEVAVKAAEIQSGVGKFFQIERRAGDPSAVAGASILASLSSLKPDLTRWKSPSQTANKPQQGSDIPSHSALPDGTETALDGLEGNSAPNVATDKASDVGASDNNSLMDCDPDDAGAEAGNVKFSGVNAFIGPFLRILAGSTCKLKLSKSICKQVFEERNGTRDAQAASTSGTSVRCAVFKEDVHGAILDGKDIEVSFDNFSYYLSENTKNVLIAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHSLLGGLSSKEAELLKDGFNADKSCGSAKQSPTATDLARSMDPSACEPDTPNSSNAPTLYGFDSQPKLEADNVPSTSGTTKNCVFKLGDRIKYSSSSSGLYQLQTISSSNANRIFRGPANGSRGKVVLVFDDNPLSKIGVRFDKPIPDGVDLGGCCESGQGYFCNVSDLRLENSGIEELDKLLINTLFEVVASESRNVPFILFMKDAEKSIVGNGDPFSFRSKLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPVFCDKVGTGAVAYNRWVLSRCGMECEGLETLSIKDHTLTIENAEKIVGWALSHHLMQNAENDPDAKLVLSCESIQHGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDMDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAALAEGRPAPALSGSADIRSLNMGDFKSAHQQVCASVSSESVNMTELQQWNELYGEGGSRVKKALSYFM 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00398 1209 Gene3D - 1077 1171 - -
Pste2g00398 1209 Coils Coil 865 885 - -
Pste2g00398 1209 SMART AAA_5 941 1078 IPR003593 GO:0016887
Pste2g00398 1209 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 422 1208 - -
Pste2g00398 1209 Pfam FHA domain 147 230 IPR000253 GO:0005515
Pste2g00398 1209 MobiDBLite consensus disorder prediction 332 346 - -
Pste2g00398 1209 CDD FHA 128 240 - -
Pste2g00398 1209 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 903 1079 - -
Pste2g00398 1209 SUPERFAMILY SMAD/FHA domain 112 236 IPR008984 GO:0005515
Pste2g00398 1209 Pfam ATPase family associated with various cellular activities (AAA) 945 1074 IPR003959 GO:0005524|GO:0016887
Pste2g00398 1209 MobiDBLite consensus disorder prediction 290 354 - -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 1 36 - -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 538 552 - -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 538 591 - -
Pste2g00398 1209 CDD RecA-like_ATAD1 908 1074 - -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 1 102 - -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 560 575 - -
Pste2g00398 1209 Pfam AAA+ lid domain 1098 1133 IPR041569 -
Pste2g00398 1209 MobiDBLite consensus disorder prediction 290 313 - -
Pste2g00398 1209 Gene3D - 903 1184 IPR027417 -
Pste2g00398 1209 ProSitePatterns AAA-protein family signature. 1048 1067 IPR003960 GO:0005524|GO:0016887
Pste2g00398 1209 Gene3D - 125 247 - -
Pste2g00398 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 1181 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00398 Pste-Chr2 3456922 3476688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00398 904 1156 Calmodulin-binding Proteins AT3G56690 40.769 8.31e-43 168