Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00396 TCGTGTGTGCTGCCTTCGTTTGCAACAGAAGAATTAACATATATAGCAAGCATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGCTTGAAGAAGCTTGACGAGTACCTTCTCTCGCGCAGTTACATCACTGGGTACCAAGCTTCAAACGATGATCTTACTGTATATGCAGCTTTGCCGACTGTCCCATCAGATGAGTATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTCTGTTGAGAATCTCTGGGGTCTCTGGTGAGGGGTGTGGTGTTACTGTTGAGGGATCTCTTGTTGCTGAGCCTGCTGCAGCGGCAGAGGATGATGATGATGATGATGATGACGTGGATTTGTTTGGTGAGGAGACAGAAGAAGAGAAGAAGGCAGCCGAGGAAAGGGCTGCTGCAGTGAAGGCATCTGCAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTATTGGATGTGAAACCATGGGACGATGAAACTGACATGAAGAAGCTTGAAGAATCAGTTAGATCTGTTTCTATGGACGGGTTGCTCTGGGCCAAACTTGTGCCTGTTGGATACGGTATCAAGAAACTCCAAATTATGCTTACTATTGTAGATGACCTAGTTTCTGTGGACAATCTTATTGAAGAATATCTCACAGTTGAGCCCATCAATGAATATGTCCAGAAAATCTTACAATGGTGGGACTTGCAGAACATGGCAACGAGAGGAATCTCAAATTTAAGAAATTATGTTCGAGGGAAACTACCCTGAATTGAGAGTTTTTGTTTCAAAAACATGCTTGTTATTGTTTTATATATGTCTCTTTGTGATGTCCTCGTATTATTTGGATAGTAATCATTTTCGGCTTTAAGCCTCTCTGTGGTGTTTTTTCCTTTCCAAATTTTATTCGTAGACTAATGTTTATTTTTTTGATTCAAGAAAGTAAATTCACTTGAGAACGCACGAGACACTGCAACTATCGATAAATTGTTGGAATATTTGC 1000 0.416 MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASNDDLTVYAALPTVPSDEYVNVSRWYKHIDALLRISGVSGEGCGVTVEGSLVAEPAAAAEDDDDDDDDVDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLLDVKPWDDETDMKKLEESVRSVSMDGLLWAKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEYVQKILQWWDLQNMATRGISNLRNYVRGKLP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00396 238 SUPERFAMILY eEF-1beta-like 130 205 IPR036219 -
Pste2g00396 238 Coils Coil 105 125 - -
Pste2g00396 238 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 97 105 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pste2g00396 238 FunFam Elongation factor 1-beta 1 like 127 217 - -
Pste2g00396 238 Gene3D - 4 74 - -
Pste2g00396 238 Gene3D - 126 214 IPR014717 -
Pste2g00396 238 SMART EF1_GNE_2 133 212 IPR014038 GO:0003746|GO:0006414
Pste2g00396 238 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 212 - -
Pste2g00396 238 FunFam Elongation factor 1-delta 1 3 78 - -
Pste2g00396 238 SUPERFAMILY GST C-terminal domain-like 11 67 IPR036282 -
Pste2g00396 238 CDD EF1B 131 212 IPR014038 GO:0003746|GO:0006414
Pste2g00396 238 Pfam EF-1 guanine nucleotide exchange domain 135 211 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00396 Pste-Chr2 3426767 3428983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00396 5 210 Eukaryotic Initiation Factors Gene Family AT2G18110 73.853 7.19e-92 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00396 2 3426767 3428983 Pste2g00396 2 3426767 3428983 ECH