Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00380 ATGGAGGAAAATGAGGGTTGTAGAAACCCTGGACCACCAAATTATGCTACCTTAACACAGCAACAGCAACATGGTACCTATGTTTCATCAACCCTGCACAATGAAACAATTGAAAGCCACAACCGTGACCCTATTTTGACACACGTGGACTCATCTCAGGTGTTGAACTCCATTCCCTTTTACTACTGCAAACTGCACCTTTCCAACAACGTTAACACCAGCAGCCCCAACACTTCATCCAACAGCACCAACGACAACAATGCTGATGATCACGAAGCAAAGGCTATCATCGAAGACCGAAAGAAGAAGAGAATGTTCTCGAACCGAGAATCTGCACGCAGGTCACGGATGAGGAAAAAGCAACAGATTGAGTCGCTTCAGTGCCACCTCGATCATCTTCAGACACTGAATCGCCAACTCTCTGAGAAGATCATTTACTTGCTCGAATGCAACCAACAGATTCTCCAACACAATGCACAACTCAAAGATAAGGTTTCTTCTCTTCAAGTTACTCTCTCTGAGTTGTTGGGTCCTCTGGGACATGTTGAACACCAACACCATCACTTTCCCTCTGGGTTTGTGGCTGAGCCTTCTTCTGCTTCTGAGTTTCACCAATCGCTAGCTAGTTCCGGAGCATAG 639 0.4585 MEENEGCRNPGPPNYATLTQQQQHGTYVSSTLHNETIESHNRDPILTHVDSSQVLNSIPFYYCKLHLSNNVNTSSPNTSSNSTNDNNADDHEAKAIIEDRKKKRMFSNRESARRSRMRKKQQIESLQCHLDHLQTLNRQLSEKIIYLLECNQQILQHNAQLKDKVSSLQVTLSELLGPLGHVEHQHHHFPSGFVAEPSSASEFHQSLASSGA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00380 212 CDD bZIP_plant_GBF1 101 149 IPR045314 GO:0003700|GO:0006355
Pste2g00380 212 Coils Coil 123 143 - -
Pste2g00380 212 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Pste2g00380 212 MobiDBLite consensus disorder prediction 13 27 - -
Pste2g00380 212 SUPERFAMILY Leucine zipper domain 100 155 IPR046347 GO:0003700|GO:0006355
Pste2g00380 212 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 27 177 IPR044521 -
Pste2g00380 212 MobiDBLite consensus disorder prediction 1 27 - -
Pste2g00380 212 FunFam BZIP transcription factor 98 149 - -
Pste2g00380 212 Pfam bZIP transcription factor 98 158 IPR004827 GO:0003700|GO:0006355
Pste2g00380 212 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 147 IPR004827 GO:0003700|GO:0006355
Pste2g00380 212 Gene3D - 99 174 - -
Pste2g00380 212 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00380 Pste-Chr2 3238724 3239362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00380 65 183 bZIP Transcription Factor Family AT5G60830 51.261 1.46e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste2g00380 bZIP_1 5.1e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00380 2 3238724 3239362 Pste6g02749 6 15118267 15119224 PCT