Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00373 CAGCTTCACTTAGATTTGGTAAAAAATCCAAGTCTAAAGAGAAGACTTAAGCAAATGGAAAGGCTAAATTTTATTAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAGCCAACAGATGAAGAACTTGTCTTTCAGTACTTGAAATGTAAGATCTTCTCATGTCAATTGCCTGCTTCAATCATTCCTGAGATCAGTGTCAGCAAGTACGATCCATGGGATTTGCCAGGAAATTGTGATGAGCAAGAGAGGTACTTTTTCAGCTCCAAGGAAGCTAAGTATCGAAACGGCAATCGCATGAACCGAACGACTAACTCTGGCTACTGGAAGGCAACAGGATCAGACAAAAAAATTTCATCATCAATAAGTAATCTTGGTATTGCCGGGGTAAGAAAGACTCTGGTATTTTATGAAGGAAAGTCTCCAAATGGGTCTCGAACTGATTGGATCATGCATGAATATCGACTCGTCAGCTTAGATTTTACTGCTTCCAATTCACCCCAGAACTGTGCAAACGAGATAGGGGATTGGGTTCTGTGTCGCATATTCATGAAGAAAAGAAGTATAGAAAGTGATAACAACACTACTACTCCCAGAAAGAACAATGCAGTGAAGAATAATATTGCTCAGGTGGCTCAGCCAAGTTTCTTTGATTTTTTTAGTGTTCAAAATTTAGCTCCGGCTCCTATACATTCATCGACTTCCTCATCTTGTTCAAGTTCCAATAACATTGTAGAAGTCTCTTCACCTGATCACGAAGAATCAAGCGGCTATGCTCATTTTTAAATTCAATTTATGCATTATTTAGCTATATCTCTTCCTTTTGTTCACGTGTCTATGCTATATCCATTATGGAAAATAATCATATGCAAGAGAATATCTATATTCACGCTGCATTTGGGGCTAGCATGGAAC 921 0.3865 MERLNFIKNGVSRLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEISVSKYDPWDLPGNCDEQERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKISSSISNLGIAGVRKTLVFYEGKSPNGSRTDWIMHEYRLVSLDFTASNSPQNCANEIGDWVLCRIFMKKRSIESDNNTTTPRKNNAVKNNIAQVAQPSFFDFFSVQNLAPAPIHSSTSSSCSSSNNIVEVSSPDHEESSGYAHF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00373 245 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Pste2g00373 245 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Pste2g00373 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 216 - -
Pste2g00373 245 MobiDBLite consensus disorder prediction 216 234 - -
Pste2g00373 245 ProSiteProfiles NAC domain profile. 14 169 IPR003441 GO:0003677|GO:0006355
Pste2g00373 245 MobiDBLite consensus disorder prediction 216 245 - -
Pste2g00373 245 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00373 Pste-Chr2 3184964 3186400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00373 1 172 NAC Transcription Factor Family AT5G13180 63.953 4.54e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste2g00373 NAM 2.7e-33 No_clan