Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00336 ATGCGTCACTGCGCCATGATGGAGCCCATGGACATCGTCGGCAAGGCCAAGGAAGACGCGTCGCTTCCTAAAGCAACAATGACGAAAATTATTAAAGAGATGTTGCCGCCGGACGTTCGTGTCGCCAGAGATACACAGGATTTATTGATCGAGTGTTGCGTCGAGTTTATAAACCTCGTCTCGTCCGAGTCGAATGAAGTCTGTAACAAAGAGGAAAGAAGGACTATTGCGCCAGAGCATGTGTTGAAGGCTTTAGGGGTCCTTGGGTTTGGGGAGTACATTGAGGAAGTTTATGCAGCATATGAACAGCATAAGCTGGAGACAATGCAAGACTCTTTAAAAGGTGCCAAGTACTGCAGCAGAGCTGAAATGACTGAGGAAGAAGCATTGGCTGAACAGCAAAGGATGTTTGCAGAGGCACGAGCTAGAATGAATGGAGGAGCTATTACTTCCAAGCAGCCAGACGCCGACCAAAGTTTAGAGAGTTAACTTTTAGGACCCTTAATTTTCTTTTCAAGCATAGGCAAGTCCCTCTGACTCTTCCTTCCCTAATCCCTATGCTGTAATTTAGCTCGATTTTGCACAAATCACCCCATTTACTAGTTTGCTAGCCTACGGGAATGTGCTCGCCATTTGTGTTCTTTTAGTAATCCATTTGTAAGTTAATGTAATTATTGGAGTTCATCTAAACCTTTGTCTATTTAGAATTACATGTAAATTATTTCATTTACCTGTTGTATCCTACACTAACAGTTCTTTGCTTAATTTTGACAATAGTGGCTATATTAGATTGTAGCAATCTATTATACTGTTTATAATTATTATAATAATATATAGAAAGCCATGAAGATTTCAC 856 0.41 MRHCAMMEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETMQDSLKGAKYCSRAEMTEEEALAEQQRMFAEARARMNGGAITSKQPDADQSLES 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00336 162 Gene3D Histone, subunit A 10 149 IPR009072 GO:0046982
Pste2g00336 162 FunFam Negative cofactor 2 beta 12 149 - -
Pste2g00336 162 Coils Coil 121 141 - -
Pste2g00336 162 PANTHER PROTEIN DR1 HOMOLOG 7 161 IPR044255 -
Pste2g00336 162 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 20 85 IPR003958 -
Pste2g00336 162 SUPERFAMILY Histone-fold 18 149 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00336 Pste-Chr2 2582125 2586173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00336 7 158 CCAAT-DR1 Transcription Factor Family AT5G23090 81.169 3.05e-90 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pste2g00336 CBFD_NFYB_HMF 1.4e-21 CL0012