Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00328 TTGATGCCCCATGCAGAGGCCACAGCAGATATATACCCTGCAGATGAAGCCTATGCAATGTTCCTGTGGGTTGGCACACCAGTGCAGATTGTGTTCGTTGTGATTGACACAGGGAGCCCCATCACATGGTTCCAATGCGACCCTTGCACCAGCTGTTACCCCATGCAGCGCCCTCCCTTCAACACACGTGCCTCTGGCTCCTTCAGAGAACTTGGCTGCTACTCTGACACGAATAATTTTTCTTGCAGGTACAATGTGGAATATGAATATGCCAGGGAATCACAATCTCGTTCCTTTGGCATGATGATCACTGACACCCTCAACTTTGAGCATTCCAATGTTCAAGTCAAGGACTTCATAATGGGTTGTGGAGACTCATATGAGGGACCCTTTAGGTCTCAGTTTTCCGGAATTTTTGGTCTTGGACGTGGTCCACTTTCAGCGCAAAGTCAGCTTCATGCAAAGGCTTTTTCATTTTGCATAGTGAGATTCGGATCAGAAAAAGCCTCATTTCTTGAGTTTTATGACACACCGCCTAAACAAAACCAACATGGTAACACTAACACTTCCATTATGGTTCCCTTGAGAGAGAACAGTAGGTACCCTTACTATTACTTTTTGCAGTTTGTGGGAATAGGCATTAATGGGTTCATGTTGGATATTCAATCTAGAGTTTGGGGTTATGGCTTGAACTATGATGGTGGGGTTGTTATAGATACAGGATCAGTGCTAACCTATTTGCCACATGATGCATATAGTGTGTTCAGAACAGAAATTCTTAGAACAGATCATAACCTTACAAAGAAACTAGGATTTGATGAATTAGAGTTTTGTTATAAAGATGGTCCAACTAATGTGTATCCAACCATTGAATTTTACTTTGAAAATGGTAACATTGCAGGTCAAAACTTTGTGTCCTTCAAGTTGGACAATGACCAATTGCTTTTCATAGCAGAAGAAGGAATAGTTTGCTTAGCGATTGCAGAAGCAAAAAATTCTGCACTTACTGTGATTGGCAGTAACATCCTTCAAGGAACTATGTTAACCTATGATTTGGTTAATGAGATCCTTGTCTTCACCTATAACAAGTGTTAG 1095 0.4164 LMPHAEATADIYPADEAYAMFLWVGTPVQIVFVVIDTGSPITWFQCDPCTSCYPMQRPPFNTRASGSFRELGCYSDTNNFSCRYNVEYEYARESQSRSFGMMITDTLNFEHSNVQVKDFIMGCGDSYEGPFRSQFSGIFGLGRGPLSAQSQLHAKAFSFCIVRFGSEKASFLEFYDTPPKQNQHGNTNTSIMVPLRENSRYPYYYFLQFVGIGINGFMLDIQSRVWGYGLNYDGGVVIDTGSVLTYLPHDAYSVFRTEILRTDHNLTKKLGFDELEFCYKDGPTNVYPTIEFYFENGNIAGQNFVSFKLDNDQLLFIAEEGIVCLAIAEAKNSALTVIGSNILQGTMLTYDLVNEILVFTYNKC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00328 364 PRINTS Pepsin (A1) aspartic protease family signature 336 351 IPR001461 GO:0004190|GO:0006508
Pste2g00328 364 PRINTS Pepsin (A1) aspartic protease family signature 236 247 IPR001461 GO:0004190|GO:0006508
Pste2g00328 364 PRINTS Pepsin (A1) aspartic protease family signature 24 44 IPR001461 GO:0004190|GO:0006508
Pste2g00328 364 Pfam Xylanase inhibitor N-terminal 18 172 IPR032861 -
Pste2g00328 364 PANTHER ASPARTYL PROTEASES 14 355 IPR001461 GO:0004190|GO:0006508
Pste2g00328 364 Gene3D Acid Proteases 5 174 IPR021109 -
Pste2g00328 364 Gene3D Acid Proteases 178 364 IPR021109 -
Pste2g00328 364 Pfam Xylanase inhibitor C-terminal 205 360 IPR032799 -
Pste2g00328 364 SUPERFAMILY Acid proteases 14 364 IPR021109 -
Pste2g00328 364 ProSiteProfiles Peptidase family A1 domain profile. 18 360 IPR033121 -
Pste2g00328 364 CDD pepsin_A_like_plant 17 364 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00328 Pste-Chr2 2513572 2515188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00328 7 364 Miscellaneous Gene Families AT1G77480 23.896 3.15e-17 80.9