Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00309 TTACTTTTCAATCAATGGAGAAACACCAACTGATCATGCTCCCTACTTCATCTACATCATCAACACCATTTTCATCTCATTTTGAAATTTCTTACAATTCCACTGTGCATGCTGAGAAAGAGGTTTCAAGAACTCAAAGGAAGGAGACATCAGTAGAGAACAAAAGTGACAGAGAGATTAATGAGCACAGATATGCATTTCAAACAAGGAGTCCAGTTGATGTTCTGGATGATGGGTACCATTGGAGGAAATATGGCAAAAAGATAGTGAAAAACAATAAATTCCCAAGAAGTTACTACAGGTGCGCTCGTCAAGGGTGCAATGTGAAAAAACAAATTCAACGCCATCCCCAAGACGAACAGATCGTGGTAACAACCTACGAAGGGACACATACACACCCTGTCGATGAGTCACCGGAAAGCTTCGACCAATCTCGGGAAACCTACTCA 449 0.412 MEKHQLIMLPTSSTSSTPFSSHFEISYNSTVHAEKEVSRTQRKETSVENKSDREINEHRYAFQTRSPVDVLDDGYHWRKYGKKIVKNNKFPRSYYRCARQGCNVKKQIQRHPQDEQIVVTTYEGTHTHPVDESPESFDQSRETYS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00309 145 Pfam WRKY DNA -binding domain 72 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g00309 145 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g00309 145 Gene3D WRKY domain 54 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g00309 145 SUPERFAMILY WRKY DNA-binding domain 63 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g00309 145 ProSiteProfiles WRKY domain profile. 66 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g00309 145 SMART WRKY_cls 71 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g00309 145 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 134 IPR044810 GO:0003700
Pste2g00309 145 MobiDBLite consensus disorder prediction 122 145 - -
Pste2g00309 145 FunFam WRKY transcription factor 57 57 131 - -
Pste2g00309 145 MobiDBLite consensus disorder prediction 35 52 - -
Pste2g00309 145 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00309 Pste-Chr2 2297108 2297882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00309 59 138 WRKY Transcription Factor Family AT5G13080 71.250 1.08e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g00309 WRKY 2.1e-25 CL0274