Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00287 AAAAACCCTCTAAAAGGAGGTGTATGAGAAAGTGTGGAAGTGGAATCCTAGGGTGATAAGGTCCCTTCTTGACCTTATCCCACCACCGATTGTTTTATTTGGAAATCAATTGTGTCCATCAGATCTGAGTGTGTGAGTGGAAACGGAATGGAGAACAACCAGCAAGGCAATCAAGCGCAATCGGGAGCATACCCAGGGGCAGGGGCGGGGGCGGCAGCGGGCAGTGCAGGTGCAGGTGCAGGCGGGGCGCCGTTCCAGCATCTCCTCCACCAGCAGCAGCAGCAGCTGCAGATGTTCTGGTCATACCAGCGTCAAGAGATCGAGCACGTGAATGACTTCAAGAACCACCAGCTCCCCCTGGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATCCTCTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAACTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAAAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTCGTTGATATCGTCCCCCGCGACGAGATCAAGGACGATGCCGCCCTTGTCGGCGCCACCGCCAGCGGTGTTCCCTACTATTACCCTCCCATTGGCCAGCCTGCCGGCATGATGATTGGCCGCCCCGCCGTCGATCCCGCCACCGGTGTCTACGTCCAGCCCCCCTCCCAGGCCTGGCAGTCTGTCTGGCAGTCCGCCGCCGAGGACGCCTCCTATGCCTCCGCCGGTCCCGGTTCCCAGGGCAACCTTGATGGCCAGAGGCAATGTGGGTCATGTCCTCCATTTGGCCTTAGTTTAAGATATCTTTTGAGTTACATTGACGCCATTGATGAACTCTCAGGATTTATGAAGATGCCGAACTTGCTTGGAATTTTGGTTGCTTGCAATTTAGAAATGGTTTTGTTAACTGAATTTTTATGGGATGAACTTCTTAACTTGAACAATAGCATGATTTAACTTTTTATGTACAAAAATTTAAAACTTAACAATGATCTTTTGTGTGAAATGTGGTTGTTCATCGTCACTACTTTTTAATTTCTCATAAGTATCCCATGATTTCATGATTTTCC 1133 0.5278 MENNQQGNQAQSGAYPGAGAGAAAGSAGAGAGGAPFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSAAEDASYASAGPGSQGNLDGQRQCGSCPPFGLSLRYLLSYIDAIDELSGFMKMPNLLGILVACNLEMVLLTEFLWDELLNLNNSMI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00287 290 FunFam Nuclear transcription factor Y subunit gamma 37 146 - -
Pste2g00287 290 SUPERFAMILY Histone-fold 42 140 IPR009072 GO:0046982
Pste2g00287 290 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 42 173 - -
Pste2g00287 290 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 68 131 IPR003958 -
Pste2g00287 290 Gene3D Histone, subunit A 35 146 IPR009072 GO:0046982
Pste2g00287 290 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00287 Pste-Chr2 2072737 2077394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00287 29 225 CCAAT-HAP5 Transcription Factor Family AT3G48590 81.340 3.05e-105 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pste2g00287 CBFD_NFYB_HMF 3.6e-17 CL0012