Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00275 GCTATCATTTGATTTCATTTTCCACTCTTCTTCATGGCACATCCTCGCGAATCTCACTCCAGAAACCACCACCCTTCTTAGTAGCGCAAGCATCGCCGAAACGGCATCGTTTTGAAATGGCAATGTGGGTTCCCTTTCACGTGACGGCAATTGTGTTGATCTGCATAGTGGTGATGACGCATCCGAGTGAGCGAGTCAACGCGGAGCCGACTCAGGACAGGCAAGCGCTGCTCCAATTCATTTCCCTCACCCCGCACGCGAACCGGGTCCAGTGGAACGCATCCGGTTCGGCCTGCGACTGGTTTGGCGTGCAATGCGACTCGAACCGCTCCTTCGTGTACTCTCTCCACCTCCCCGCCGTCGGCCTGGTGGGCCCCGTCCCTCCCAACACCATCGGCCGCCTCACGCAGCTGCGCGTCCTCAGCCTCCGCTCCAACGCGCTCACCGGCGAGATCCCCGCCGATTTCGCCAACCTCACCATGCTCCGCAACCTCTACCTCCAAAACAACCACTTCTCCGGCGAGTTCCCTGCCGCGTTGACTCGCCTCACTCGCGTGACTCGCCTCGAACTCTCCTCCAACAACTTCACCGGCAGTATCCCGTTTTCGCTCAACAATCTCACTCACTTAACCGGTCTCTTCTTAGAAAACAACTCTTTCTCCGGTAACCTCCCCGCTATTACGTTAAACCTAACTAACTTCAACGTTTCCAATAACCGCCTCAACGGCTCAATCCCCAACGCGCTCTCGCATTTCCCCGCGACGTCGTTTTCAAATAACAAAAACCTCTGCGGGAAACCGTTACAGCCTTGCACACCTTTCTTCCCCGCTCCATCTCCATCGCCTGATGTTTCACCGGCGCAGCCGGTGGAACATCACCACCAGAATCTCTCCACCGCCGCCATTGTAGGAATCGCAGTCGGATCCGCCATACTAGCCTTGCTGTTACTCTCACTTATCATCTTCCTCTGCTGCCGCCGCCGGCCGCGTCGGGCGAAACCGCCTGCGGCGGTTTCGACGGCGCGTGGAGGAGACGTTGCGACGTCGTCTTCGAAGGACGACATCACCGGCTCCGTGGAAGCGGCGGAGAGGAACAAGCTCGTGTTTCTGGAAGGCGGAGTGTACGGATTCGGATTGGAAGACTTGCTGCGAGCTTCGGCTGAGGTGTTGGGGAAGGGAAGCATGGGGACTTCTTATAAGGCGATATTGGAGGACGGAACGACGGTGGTGGTGAAGCGGTTGAAGGACGTGGCGGCGGCGAAGAGAGAGTTCGAGTCGCAGATGGAGGTTGTTGGAAGCGTTAAGCACGAGAATGTGGTTCCTCTCAGAGCGTTTTACTTCTCCAAAGATGAGAAATTGCTCGTCTACGATTACATGGCCGCCGGCAGCTTGTCTGCACTTCTTCACGGGAGCAGAGGGTCAGGGCGAACGCCGTTAGATTGGGACACCCGAATGAAAATAGCACTGGGAGCCGCACGAGGCATCGCGTGCCTCCACGTGTCAGCGAAGCTGGTCCACGGCAACATAAAATCCTCCAACATCCTCCTCCACGACGCGACCCACGACCCCTGCGTCGCCGACTTCGGCCTGAACCCAATCTTCGCGAACCCGGTCCCATCGAACCGGGTCGCGGGGTACCGGGCCCCGGAGATTCTCGAAACGCGAAAACCCACTTTCAAATCCGACGTGTACAGCTTCGGAGTCCTCCTTCTGGAGCTTCTCACAGGCAAGGCGCCGAACCAAGCCTCGCTCAGCGAGGAAGGGATCGACCTTCCGCGGTGGGTTCAGTCCGTGGTTCGCGAAGAGTGGACCGCGGAAGTGTTCGACGCCGAATTAATGCGTTTTCATAACATCGAAGAGGAGATGGTGCAGCTGCTGCAGATTGCTATGACGTGCGTTTCGCTCGTGCCCGATCAGCGCCCAAACATGGAAGAAGTGGTGCGCATGATCGACGACATTAGCCGCAGCGTAAGCACCGATGAGGGGCTGCGTCAGTCGTCTGATGATCCCTCCAAAGGATCAGACGCTCACACGCCGCCTCAGGATGCCAGGACTACCCCTCGATCCGACACGTCATAGTGATCATCAAGCTGTAAAGTGGATATAATCATCAAAAGCAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGGAAAAGTCGTTGGAGAAAGGAAAATGAAAAAACGTGCAAAGTTAAGTAAATAAATGAGGTGTTAATTATGGCGCGCGGGGTTATTGTGCAAGTTAAATGTACTTTTATTTAATTTTTTTTGTTGTATTTTAATGATTTTTTATTTTATTGATTTCAATTATTTTTGTAGTGGGGGAGAGTTTGAATTGTCGATGAAAGTTGGGACTCTGGGTTGCTTAGTCTTTTTTTTTTATTATTTAATTTTTGTCCAAAATAAAGC 2411 0.5359 MAMWVPFHVTAIVLICIVVMTHPSERVNAEPTQDRQALLQFISLTPHANRVQWNASGSACDWFGVQCDSNRSFVYSLHLPAVGLVGPVPPNTIGRLTQLRVLSLRSNALTGEIPADFANLTMLRNLYLQNNHFSGEFPAALTRLTRVTRLELSSNNFTGSIPFSLNNLTHLTGLFLENNSFSGNLPAITLNLTNFNVSNNRLNGSIPNALSHFPATSFSNNKNLCGKPLQPCTPFFPAPSPSPDVSPAQPVEHHHQNLSTAAIVGIAVGSAILALLLLSLIIFLCCRRRPRRAKPPAAVSTARGGDVATSSSKDDITGSVEAAERNKLVFLEGGVYGFGLEDLLRASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAAAKREFESQMEVVGSVKHENVVPLRAFYFSKDEKLLVYDYMAAGSLSALLHGSRGSGRTPLDWDTRMKIALGAARGIACLHVSAKLVHGNIKSSNILLHDATHDPCVADFGLNPIFANPVPSNRVAGYRAPEILETRKPTFKSDVYSFGVLLLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMTCVSLVPDQRPNMEEVVRMIDDISRSVSTDEGLRQSSDDPSKGSDAHTPPQDARTTPRSDTS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00275 653 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 420 625 - -
Pste2g00275 653 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Pste2g00275 653 Pfam Protein kinase domain 348 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00275 653 Pfam Leucine rich repeat 88 133 IPR001611 GO:0005515
Pste2g00275 653 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Pste2g00275 653 SUPERFAMILY Protein kinase-like (PK-like) 349 611 IPR011009 -
Pste2g00275 653 Gene3D Ribonuclease Inhibitor 192 232 IPR032675 -
Pste2g00275 653 SUPERFAMILY L domain-like 32 231 - -
Pste2g00275 653 ProSiteProfiles Protein kinase domain profile. 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00275 653 FunFam pollen receptor-like kinase 1 314 419 - -
Pste2g00275 653 MobiDBLite consensus disorder prediction 633 653 - -
Pste2g00275 653 CDD STKc_IRAK 351 614 - -
Pste2g00275 653 PANTHER OS05G0588300 PROTEIN 10 625 - -
Pste2g00275 653 FunFam Probable inactive receptor kinase RLK902 31 189 - -
Pste2g00275 653 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Pste2g00275 653 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Pste2g00275 653 MobiDBLite consensus disorder prediction 617 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00275 Pste-Chr2 1944498 1949317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00275 7 638 Receptor kinase-like Gene Family AT5G58300 53.738 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste2g00275 Pkinase 2.6e-35 CL0016