Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00261 TTTTCAGAGAATATACAGCACCTAGGGGAAGAGGAAAACACTGTCTGGATTTGATGTCATGCCATCCTCCCCTCCTCTTTTTCCCCTTCTTTTCAGCTTTTCAGCCGTTACAAAGTTTCCTTTCTTTCCTCCTCTTGTGTAATTTCTATTCTCTTCCTTCAAGACCGTTGCTTGAGCCAAAACTTGGTTTGTGAGTGAAACGTGAAACTTATTGTGCCATAAAAACCTTTCAGTTTCTTTTTCCCACCTGTAATCTGTCTTCTTCTTACCTCCCCTAACAGACAATCATAATTTAAACAAACTGGCTTGTGTGTGCATTCCACAGAACTTCACTGCCAAGTGCAAAATGAAGGATCCAGAGGAGCACCAAGTGAAATCTAGAAGGCCTCTTCAGAAATCTGCAGAACGTAGAAGAAGGTGCAGGAGAAGGAGCCAGTGCAAGCCAGAGAAATTACAAGAAACTGAACTTGATTTGCAGCTTGGTTCCAATGCCACTTGCAAGAGTCTTGTGTTTCATCAAAGACCTGGTTTTGGCCAACTTGGTACTAAGTGTCTCATCAAAGCTAACCACTTTCTCGCTGATATATCAGTTTCTGACTTGAGCCATTACAATGTTAAAATAACACCTGAAGTCACATCTCGTAAAACAAATAAGGCTATCATAGCAGAGTTGGTTAGGCTTCACAGGAACACTGACTTGGCGACAAGGCTACCTGTGTATGATGGAGGAAGAAACCTTTACACTGCTGGTTTGCTTCCTTTTACATACAAAGAGTTTAATGTAACATTGAGTGAGGATGATGATGTTATGGGTGGTACCAGGGAAAGGGAGTTTAAGGTGGTAATCAAGTTTGCAACTCGTGTTAGCATGCATCAACTACATGAACTTCTTAGTGGGAAACAAGTGAACAATGCACAAGAAGCGCTAAGTGTCTTTGACATTGTGTTAAGGGAGCTTGCGGCTCAAAGGTACGTGTCAATTGGGAGGTTTCTCTATTCTCCTGATGTAAGAAAACCACAGCAGTTGGGTGGTGGTCTTGAATCATGGAGAGGCTTCTACCAGAGTATAAGGCCTACTCAAATGGGATTGTCACTAAACATTGATATGTCATCAATGGCTTTTATTGAACCACTTCCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTTCACTCAAAGCCGTTGTCGGATGCAGATCGTGTAAAGATCAAAAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACACATAGAGGAAATTTTCGAAGGAAGTATAGAATATCAGGATTGACTTCACAGCCTACAAGGGAGCTTATTTTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATTTACTATCAAATATTCTCATCTACCTTGCCTTCAAGTAGGAAGTCCAAGGAAGGTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTAAATGAAAAACAGATAACTTCTCTGTTGAAGGTCTCATGCCAAAGGCCACGTGACCAAGAGACAGACATTTTACAGACAATTCAGCAAAACAATTATGAGAATGATCCCTATGCAAAGGAGTTTGGCATCAACATAGACAACAAGCTTGCTTCAGTTGAGGCCCGGGTTCTTCCACCCCCATGGTTGAAATATCACGACACTGGAAGAGAGAAAGAATACTTGCCACAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTTATAAATGGAAGTATTGTTAGATATTGGACATGTATCAATTTCTCACGAAGCGTACAGGAAAGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAATCTGGACCCTGTGATCCCTATATCTTTGGCAAGACCAGATCAGGTAAAGAAGGCTTTGAAGTATGTACATTCTGCTGCTATAGAGAAACTTGATGGGAAAGAGCTAGAGTTGCTGATTGCCATTCTTCCAGATAATAATGGTTCTCTGTATGGTGATCTCAAAAGAATCTGTGAAACAGATTTGGGGTTGATTTCTCAATGCTGCCTTACAAAGCACGTATTCAAGATCAATAGACAGTACCTGGCTAATGTGGCACTAAAAATAAACGTCAAGATGGGAGGAAGAAATACAGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTGTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGATTGGCCTGAAGTAACGAAGTATGCAGGGCTGGTTTGTGCTCAGCCTCATCGAGAAGAACTCATTCAAGATCTTTTCAGATGTTGGAAAGATCCACAGAGGGGTGTAGTTTATGGTGGTATGATCAGGGAGCTTTTACTATCATTTAAAAAAGCGACAGGACAAAAACCATTGAGAATAATCTTTTACAGGGATGGTGTAAGTGAAGGACAATTCTACCAGGTTTTGCTATATGAGCTTGATGCCATTCGCAAGTGTCCAAATAAAAATGGATCTTCTTATTCCCCAATATCATTTACAAGTACTGTGGTAGATTCCAAGATCTGTCATCCTTCCGAATTTGACTTCTACTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCAGCACACTATCATGTCCTCTGGGACGAGAACAATTTCACTGCAGATGAGATTCAGTCTCTAACCAACAATTTATGCTACACTTATGCAAGATGTACACGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCCCATCTAGCAGCCTACAGGGCTCGATTCTACATGGAACCTGATGTTGCTGAGATAACCAAACTTCGAGGTACGAGGTCGAAAGAAGGACCTGTTCGGCCACTGCCTGCTCTGAAAGAAAGGGTGAAGAATGTTATGTTTTATTGTTGAGTAGAGCAGTGAAGAATGTTATGTTTAACTGTTGATTAGAGCAGTGAGAATTTTATGTTTTGACTGTTGAATGAGGCGCAATAAGAGGCTTCAAAGTAGAGGAAACAGCAGCATACATAGTAAAAGGAAACTAATTTGAGGTGAAAAGGTTGTTCATGTTCATATCATAAGCAAGTTCTGCATGGAAAATTTTAGGTGTGTCTTTAAAGTCTTAGTTTCCTCTCCTGCCATCTTAACTTAATAGTTAATACTACCTCCATCCTAGTGTAAGA 3255 0.4074 MKDPEEHQVKSRRPLQKSAERRRRCRRRSQCKPEKLQETELDLQLGSNATCKSLVFHQRPGFGQLGTKCLIKANHFLADISVSDLSHYNVKITPEVTSRKTNKAIIAELVRLHRNTDLATRLPVYDGGRNLYTAGLLPFTYKEFNVTLSEDDDVMGGTREREFKVVIKFATRVSMHQLHELLSGKQVNNAQEALSVFDIVLRELAAQRYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGFTIKYSHLPCLQVGSPRKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPRDQETDILQTIQQNNYENDPYAKEFGINIDNKLASVEARVLPPPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWTCINFSRSVQESTARGFCQQLVQMCQISGMEFNLDPVIPISLARPDQVKKALKYVHSAAIEKLDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFRCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKCPNKNGSSYSPISFTSTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVAEITKLRGTRSKEGPVRPLPALKERVKNVMFYC 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00261 878 CDD Piwi_ago-like 421 841 IPR045246 -
Pste2g00261 878 Gene3D paz domain 257 381 - -
Pste2g00261 878 ProSiteProfiles PAZ domain profile. 263 377 IPR003100 GO:0005515
Pste2g00261 878 MobiDBLite consensus disorder prediction 1 15 - -
Pste2g00261 878 SUPERFAMILY Ribonuclease H-like 540 843 IPR012337 -
Pste2g00261 878 Gene3D - 441 614 - -
Pste2g00261 878 SMART DUF1785_2 210 262 IPR014811 -
Pste2g00261 878 SMART Piwi_a_2 551 842 IPR003165 GO:0003676
Pste2g00261 878 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
Pste2g00261 878 Pfam Argonaute linker 2 domain 406 449 IPR032472 -
Pste2g00261 878 ProSiteProfiles Piwi domain profile. 551 842 IPR003165 GO:0003676
Pste2g00261 878 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 843 - -
Pste2g00261 878 Pfam Mid domain of argonaute 460 537 IPR032473 -
Pste2g00261 878 Pfam Piwi domain 552 752 IPR003165 GO:0003676
Pste2g00261 878 Pfam Piwi domain 758 841 IPR003165 GO:0003676
Pste2g00261 878 MobiDBLite consensus disorder prediction 1 31 - -
Pste2g00261 878 Gene3D - 620 755 IPR036397 GO:0003676
Pste2g00261 878 Gene3D - 756 878 IPR036397 GO:0003676
Pste2g00261 878 FunFam Protein argonaute-2 256 382 - -
Pste2g00261 878 Pfam PAZ domain 267 393 IPR003100 GO:0005515
Pste2g00261 878 SUPERFAMILY PAZ domain 258 417 IPR036085 GO:0005515
Pste2g00261 878 CDD PAZ_argonaute_like 262 376 - -
Pste2g00261 878 MobiDBLite consensus disorder prediction 16 30 - -
Pste2g00261 878 SMART PAZ_2_a_3 267 399 IPR003100 GO:0005515
Pste2g00261 878 FunFam Argonaute 10 441 614 - -
Pste2g00261 878 Pfam Argonaute linker 1 domain 211 260 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00261 Pste-Chr2 1667151 1678609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00261 56 878 Eukaryotic Initiation Factors Gene Family AT5G43810 70.964 0.0 1292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00261 2 1667151 1678609 Pste2g00261 2 1667151 1678609 ECH
Pste6g02853 6 16341150 16348678 Pste2g00261 2 1667151 1678609 PCT