Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g00255 | AAAATAACAGTAAAGAGTGAGAGTGTGTTGGAGTTCCACGTGTACAAGGAAGGAAGCAGAAGAAGAAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGGAAGAAGGGATAGAAAGGGTGAGGGTGAGTGTATGTGATCCTCTTCTCATCATTTGGTGCTACGGGGGAAGCGGTGGTTGGTTGGAGTAGTGTAAGGTTCAGTTACAACTATTTCTCTCTCTCTGAAGGGCAAGGGCAAGGGCAAAGGCAAAGGCAAAGGCAAAGGCAATGCCCTTTTCCTTCTGCAACGTCCTCTTCCTTTAACTCCCCTCTTTTCCCCTTAGAAGCAGCCAAAAGGAAAGGGTGGTTTGATAAGTGAAACGGAAAGAAGAGCGAGATAAGCATGATGTCTGGAAGCTGGATGGAGGAACGGCAAGACGACAACACAGGTTTTGGCGAAAACACAAACCGCGGCACGGACGAGTTGGCCTCTCTCTGCGCCTTTAAACCGATGTTGGAACTGGACGAGGAATGGTACATGAGTAACCAGCACAACCAAGACATGTCTTTTTCCCCCAACTTCCCAGAGGCAGAGCCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGACAACCTCTTACTGAACGCTGTGGACTGTTCCTCCTCCGTCTTCAACACCCTCGACCCCCACATCCACTATTTTCTCCCTCCCAACCCCAAACCACTCAACCCCTTCGATATGCCCTTTCTTGACCCTCAAGCTTCCTCCTCTCTCCCCTTACCTCCTCCTCACTCTTTCGCCGGCTTTCACACCCTCCACGACCGCTCCAACATTCTCCGCCCTCTTCAATCTTTCCCTCCCTCCGGTGCCCCCCCCACTCTCTTTCAGAAGCGCGCTGCCCTCCGCAAAAACATCTCTCTTCCCAAAATGAAGGACAAGGACACTCACACCCACAAGGACCTCCTCGACGATGCCTCTGCCTTCAACTATGATTCTGATGATTTGACTGACAGTAACAATAATAACACCTCCATTCTCCACCACCCTGCTTCTAAGAACTGTGCCAACAGCTCCAATGCCAACAGCACCGTCACCGCTTTCGATCACAAAGGCAAGAAGAAGGGAATGCCCGCTAAGAATTTGATGGCCGAACGCCGCCGCAGGAAGAAGCTCAACGACAGACTCTACATGCTCAGGTCCGTTGTTCCTAAAATCAGCAAAATGGACAGGGCTTCCATTCTTGGAGATGCAATTGAGTATCTTAAGGAGCTTCTCCAACGGATCAATGATCTTCATAACGAGTTGGAGTCCACCCCTGCTGGTTCTGCACTCACTCCTGCATCAAGTTTCCATCCTTTGACTCCCACTCCTCCTACGCTGCCTAGCCGTATCAAAGAAGAACTTTGCCCCACCTCATTGCCAAGCCCCAATGGCCAACCTGCTAGGGTTGAGGTTCGGCAGCGCGAAGGAAGGGCTGTTAATATTCACATGTTTTGTGCCCGCAAACCCGGTCTGTTGCTCTCAACCATGAGGGCTTTGGATAACCTTGGATTGGACATTCAGCAGGCAGTTATTAGCTGCTTCAATGGATTTGCTATGGATATTTTTCGAGCTGAGCAATGCAAAGGAGGTCAGGAGGTCCATCCGGAGCAAATCAAAGCAGTTCTCTTGGATTCCGCTGGATACAATGGCATGATGTAACTAGTTTTGACAAGAAACAAGCTAGAAGCTGCCATTTCACAGTAAATTTAGCAAGTTTAATCAGTTTTTGCTTTTAATGTCACAATTCAAGTGTACGATACTAGTTCTGTCACTTCAGTTTAAGTTGAGGTCGAAGAAATTTTCTCATGAATTTACCCCGGCAGCAGTAGTTACTGTTTGGTACGTTTCACATGTTCATGTCGAACCGAAAGTTGATGCTACTGTCTTCGAGTTCAATTAGTTCAGAGACCATTCTGAAGGCGCGTTTTGACGTTAAGTTTGTATTTATAATTGTCCAACCTATTGTCCTCTTTATACGGTTTTCAACAAGGACAAAACTTTAAAGCGACTTTCTTTTTTGGTGTTTTTCC | 2068 | 0.4802 | MMSGSWMEERQDDNTGFGENTNRGTDELASLCAFKPMLELDEEWYMSNQHNQDMSFSPNFPEAEPEAEAEAEAEAEAEADNLLLNAVDCSSSVFNTLDPHIHYFLPPNPKPLNPFDMPFLDPQASSSLPLPPPHSFAGFHTLHDRSNILRPLQSFPPSGAPPTLFQKRAALRKNISLPKMKDKDTHTHKDLLDDASAFNYDSDDLTDSNNNNTSILHHPASKNCANSSNANSTVTAFDHKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPAGSALTPASSFHPLTPTPPTLPSRIKEELCPTSLPSPNGQPARVEVRQREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKGGQEVHPEQIKAVLLDSAGYNGMM | 436 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g00255 | 436 | CDD | bHLH_AtAMS_like | 248 | 312 | - | - | |
Pste2g00255 | 436 | Gene3D | - | 239 | 309 | IPR036638 | GO:0046983 | |
Pste2g00255 | 436 | Pfam | Helix-loop-helix DNA-binding domain | 252 | 294 | IPR011598 | GO:0046983 | |
Pste2g00255 | 436 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 248 | 313 | IPR036638 | GO:0046983 | |
Pste2g00255 | 436 | Coils | Coil | 284 | 308 | - | - | |
Pste2g00255 | 436 | MobiDBLite | consensus disorder prediction | 307 | 333 | - | - | |
Pste2g00255 | 436 | CDD | ACT_UUR-ACR-like | 365 | 425 | - | - | |
Pste2g00255 | 436 | MobiDBLite | consensus disorder prediction | 51 | 75 | - | - | |
Pste2g00255 | 436 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Pste2g00255 | 436 | SMART | finulus | 251 | 300 | IPR011598 | GO:0046983 | |
Pste2g00255 | 436 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 85 | 433 | - | - | |
Pste2g00255 | 436 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 245 | 294 | IPR011598 | GO:0046983 | |
Pste2g00255 | 436 | FunFam | BHLH transcription factor | 241 | 309 | - | - | |
Pste2g00255 | 436 | MobiDBLite | consensus disorder prediction | 211 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g00255 | Pste-Chr2 | 1618536 | 1622211 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g00255 | 137 | 409 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G26744 | 63.830 | 4.14e-110 | 331 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pste2g00255 | HLH | 1.5e-09 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste7g00470 | 7 | 4473997 | 4475363 | Pste2g00255 | 2 | 1618536 | 1622211 | ECH | |
Pste2g00255 | 2 | 1618536 | 1622211 | Pste2g00255 | 2 | 1618536 | 1622211 | ECH |