Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00249 AGGGAACAAATGATATAAGTTTCTATGAATTTGATGCATCAGTACTTTGGATAGCAACTCAACACAATCTAGCAACCCATGACCCATCATAGTCATACATTATACAAAAAAACTTCTCCTTTAATTTCCTCACACATCTTTTTTCTTCATCTATCTCTTTCTCTTTCTCTTTTCCAGTTTTCACTCCCAATCCCAACCCCAACCAGTCTCCACAATTTCTCTCCATGTTCACAAAGATTCCAGTGCAAGCAAATACATGGAGCGTTTGGAGAACGTGATGGACATGGAGTGTCAACTCGCTTTCGACAAAATCCTCTACGATCCATCCAACATAGGGTCCTGGGTGGACACGCTCCTCTCCGAGTTCAACCAAACGCCGTCGTTTCACGATTTCTCAGACCTACCCGATCTGGGAATAGATCAAAACCCTAAACCGGCGATGGTAACAACCGTGGAAGAAGACTCGGCGATAAGACTCGTCCACACGATGATGACGTGTGCGGATTCAGTCCAACGTGGCGACCTCCCATTCGCCGCGTCCCTCATCGAGAACATGCAGGGGATGATGCTAGCTCACGTGAACACAGCCTGCGGCATCGGGAAAGTCGCCGCCGTCTTCGTCGACGCCCTGCGCCGCCGCGTCTTCGCGCAGAGCGTGGTGGTTTACCACAACGACGTCGTGTTGTACAACCATTACTACGAAGCGTGTCCTTACTTAAAGTTCGCGCACTTCACCGCCAACCAGGCGATTCTGGAGGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTTAATCTCATGCAGGGGCTCCAGTGGCCCGCGCTGATCCAGGCCCTCGCGCTGCGGCCCGGCGGCCCGCCCTTTCTCCGGCTCACGGGCTTCGTCCCGCGGGATAGCGTAATCGGCCAGCGCCTCGCCGAGCTCGCGCGATCCGTTAACGTAAGGTTTTCTTTTCACGGCGTGTCGGCTTGCCGGCTTGAGGATGTCAAGCCGTGGATGCTGCAGGTGAGCCCCAATGAAGCCGTGGCTGTTAACTCGATAATGCAGCTGCACCGTGTCCTCGGGTCGGGTCCTTCGGTAACCGAAAATGTACTATCCATGATCCGAAGCTTGAACCCGAAGATTGTTACCCTCGTGGAACAAGAAGCGAACCACAACGGGGATTTTTTCTTGGAGCGGTTCACCGAGGCGCTGCATTACTACTCGACCGTTTTCGACTCGCTGGAGGCGTGTCCGGTCGAACCGGATAAAGCCTTGGCGGAGATGTACTTACAGAGGGAGATATTCAATGTGGTGTGCTGTGAGGGAGCGGCTCGGGTTGAGAGGCACGAACCACTGGCTAAGTGGAGGGAGCGGCTCGGGAGAGCCGGGTTCAGACCGCTGCATTTGGGTTCGAATGCGTTCAAGCAAGCCAACATGTTGTTGAGTCTTTTCTCGGCTGAGGGGTACTGCGTTGAAGAGAATCAAGGCTGCTTGACTCTCGGCTGGCATAGCCGTCCTTTAATTGCGGCTTCAGCTTGGCAAGCCGCGCCGATGTAAGAAGGCAAAACGCTGCGTTTTGAGCTGTGAAAAATTGTTTATTTTTTTTTTATATATACAATCAGTTCCTTCAGGTGAGTCATATTTGAGATAAAGTGATATTTCCAGATTCCATATGCAAATTGAGGGATGAAATAGATTTTGGTTAAGAGAACTTGTGCCAATAATTTTGGTAATTTACAATTATTTATCTATTTATTGTAGTAATTAGCAAACAGAAAGGGTGGTGTATAATGTATATTTCTCGGTTTCTTTTTGAC 1803 0.5025 MERLENVMDMECQLAFDKILYDPSNIGSWVDTLLSEFNQTPSFHDFSDLPDLGIDQNPKPAMVTTVEEDSAIRLVHTMMTCADSVQRGDLPFAASLIENMQGMMLAHVNTACGIGKVAAVFVDALRRRVFAQSVVVYHNDVVLYNHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPFLRLTGFVPRDSVIGQRLAELARSVNVRFSFHGVSACRLEDVKPWMLQVSPNEAVAVNSIMQLHRVLGSGPSVTENVLSMIRSLNPKIVTLVEQEANHNGDFFLERFTEALHYYSTVFDSLEACPVEPDKALAEMYLQREIFNVVCCEGAARVERHEPLAKWRERLGRAGFRPLHLGSNAFKQANMLLSLFSAEGYCVEENQGCLTLGWHSRPLIAASAWQAAPM 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00249 428 Gene3D - 1 37 IPR038088 -
Pste2g00249 428 Pfam GRAS domain family 74 424 IPR005202 -
Pste2g00249 428 ProSiteProfiles GRAS family profile. 65 424 IPR005202 -
Pste2g00249 428 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 420 IPR005202 -
Pste2g00249 428 Pfam Transcriptional regulator DELLA protein N terminal 1 41 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00249 Pste-Chr2 1552086 1553991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00249 1 424 GRAS Transcription Factor Family AT1G14920 43.595 1.09e-132 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste2g00249 GRAS 1.9e-119 CL0063