Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00248 CTAAGTCATAAACCCTAAGCATCAGGTTTCGGCTATAAAACCTTTTGTACTTGTTGCTGCACCTCACTTTGGCGCCGTTTTACACCCTCTGCTCTCCACAATGGCTCCTCCCAGAGGTCGTGGTGGTTTTGGTGGTGGGTTCAGGGGTGGCAGGGGTGACAGAGGCAGAGGAAGGGGTGGTGGAGGAAGAGGGGAGACAGAGGCACCCCTTTCAAAGCTAGAGGCGGTGGCAGAGGCGGTGGCCGCGGAGGAGGCAGGGGTGGTGGTCGTGGTGGTGGCCGAGGGGGGTAGCAAGGTTGTTGTTCAGCCCCATAGACATGAAGGTATTTTCATTGCCAAGGGTAAAGAAGACGCTCTTGTTACTAAGAATCTTGTTCCCGGTGAAGCTGTTTACAATGAGAAAAGGATTACTGTTCAGAACGAAGATGGTTCCAAAGATGAGTACAGAGTTTGGAATCCTTTCCGCTCAAAGTTGGCTGCTGCCATCCTCGGTGGTGTTGACAATATATGGATTAAACCTGGAGCCAGAGTCCTTTACCTAGGAGCTGCTTCTGGGACTACTGTTTCTCATGTGTCGGACGTTGTTGGCCCTACAGGAGTTGTCTATGCGGTAGAGTTTTCCCATAGAAGTGGACGTGACTTGGTCAATATGGCAAAGAAGCGAACTAATGTAATACCCATTATTGAAGATGCTAGACATCCAGCTAAGTACAGGATGTTGGTTGGAATGGTTGATGTCGTATTTTCTGATGTTGCTCAGCCTGATCAGGCAAGGATTTTGGGGTTAAATGCTTCATATTATCTGAAAGCAGGAGGTCATTTTGTTATTTCAATCAAGGCCAACTGCATAGACTCCACTGTCCCTGCTGAGGCAGTGTTTGAAAGCGAAGTGAATAAGTTGAAGGCAGATCAATTCAAACCATTTGAGCAAGTCACCCTTGAACCATTTGAGAGGGACCATGCCTGTGTGGTTGGTGGATACAGAATGCCCAAGAAGAAAAAAGATGGAGCTGAATAGATTGCTTTCCAGTAGTCTGTTGACATGTACTAAATTTAATCAGATTTGTGTTTTTTTTTGTTGAAATTTTGGGTCTCAAACAAATTTGCTATTTTGGGAGTATGTGATTGGCAGAATGCCCCAAAAGAAAAAAGATTCTGTGGAGTATATTATATTCTTTTCCATTAGCCAGTAGTATAGCCAAAAAATGGGCCCAAAACCCGTTGGTCAGCTCATCACCTGCCCGTCTGAAACAAAAAAAAAAAGTTTGCTGTATTAAAAATACATATAGGTTCATTTATAATCTGATTCATTTGCAC 1317 0.4487 MAPPRGRGGFGGGFRGGRGDRGRGRGGGGRGETEAPLSKLEAVAEAVAAEEAGVVVVVVAEGGSKVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDGAE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00248 305 ProSitePatterns Fibrillarin signature. 166 180 IPR020813 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 166 183 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 141 162 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 86 105 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 273 294 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 191 220 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 114 133 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PRINTS Fibrillarin signature 221 250 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 PIRSF Nop17p 12 298 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 FunFam Fibrillarin like 1 119 296 - -
Pste2g00248 305 Hamap Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. 82 295 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 292 IPR029063 -
Pste2g00248 305 MobiDBLite consensus disorder prediction 1 36 - -
Pste2g00248 305 Gene3D Phosphorylase Kinase; domain 1 63 118 - -
Pste2g00248 305 SMART Fibrillarin_2 68 296 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pste2g00248 305 FunFam Fibrillarin like 1 63 118 - -
Pste2g00248 305 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 6 300 - -
Pste2g00248 305 Gene3D Vaccinia Virus protein VP39 119 296 IPR029063 -
Pste2g00248 305 Pfam Fibrillarin 68 295 IPR000692 GO:0003723|GO:0006364|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00248 Pste-Chr2 1550785 1554433 Dispersed