Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00225 ATGGAGGGAAGATCACATTCTTCTGAAAGAGAAGAGGAATATGATATGTTCCCAATATATTCTGAAAGATCGCAGCAAGACATGTCTGCCATGGTCTCTGCTCTCACACAAGTCATTGGGGGCTCAAATAATGATTCTCTTCAGCTGCATGAAGGCCCTTTAACTTCTCCTCACAACACCTCAACCCAGAATAATGAACAATCCCATCTACCACAACAAGATCAAGGGAGTGCGAGAAGAAGACACTATCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGGCTGCAGAGATTCGAGATCCGAAGAAAGCAGCAAGGGTATGGCTTGGAACCTTTGAAACTGCTGAAGCAGCAGCTCTTGCTTACGATGAAGCTGCTCTGAGATTCAAAGGAAGCAAAGCAAAGTTGAATTTCCCGGAAAGGGTTCAAGGAAGTGAATTTGGTTACCTCACAAATCAACACGTGTCATCATCAAGCTCTAGTAGCGAGCAAACTTCTAACCCTGTTGCTCCACACTTGACTCAAGAAACTTATTCTCCAAGTCAATTTCAGTATTCAGATCAAATAATGGGTGATGGTGGGAGTAACATTTTCAATCAGGATACGTTTCGTTTCTATGGGGGTGACATGTATGTTTCTTCTCACCCAGCTGCATCTTCCTCTTCTTCCAGTACTGCACTCTCCCAGCAGGATGAAGAGTTTCTCAGATTTTCTATGCAATTTGGAGCTTCTTCTACTTCTCACCCTTCTAGAAACTGGAGGGGAGGACATTGA 774 0.4419 MEGRSHSSEREEEYDMFPIYSERSQQDMSAMVSALTQVIGGSNNDSLQLHEGPLTSPHNTSTQNNEQSHLPQQDQGSARRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGSEFGYLTNQHVSSSSSSSEQTSNPVAPHLTQETYSPSQFQYSDQIMGDGGSNIFNQDTFRFYGGDMYVSSHPAASSSSSSTALSQQDEEFLRFSMQFGASSTSHPSRNWRGGH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00225 257 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Pste2g00225 257 PANTHER DNA-BINDING DOMAIN 42 211 IPR044808 GO:0003700|GO:0009873
Pste2g00225 257 MobiDBLite consensus disorder prediction 1 22 - -
Pste2g00225 257 MobiDBLite consensus disorder prediction 238 257 - -
Pste2g00225 257 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Pste2g00225 257 MobiDBLite consensus disorder prediction 153 174 - -
Pste2g00225 257 MobiDBLite consensus disorder prediction 42 87 - -
Pste2g00225 257 MobiDBLite consensus disorder prediction 1 18 - -
Pste2g00225 257 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Pste2g00225 257 MobiDBLite consensus disorder prediction 42 74 - -
Pste2g00225 257 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00225 Pste-Chr2 1282192 1284212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00225 15 155 AP2-EREBP Transcription Factor Family AT5G61890 64.138 7.86e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g00225 AP2 3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00225 2 1282192 1284212 Pste2g00225 2 1282192 1284212 ECH
Pste5g00451 5 2948709 2961214 Pste2g00225 2 1282192 1284212 ECH
Pste3g01324 3 8275559 8278199 Pste2g00225 2 1282192 1284212 ECH
Pste2g00225 2 1282192 1284212 Pste5g00451 5 2948709 2961214 ECH
Pste3g01324 3 8275559 8278199 Pste2g00225 2 1282192 1284212 PCT