Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00222 CCGGACTCGGAATCAAATCAGAATGATACAAAAAGGGCATTTCCGGAAATTAACCCTTCTCTCACTGTCCCTCTGCACAGGAAATTAACCCCTCTCTCTCTTTCGCCACCTTTATGCTTTCGCCTTTATCTCCACCCAAACAGTACCACCTTGCAGCACTCCTCACTTTCCAACCAAATCCATGGACCCGGACGCATTCACAGCGAGCCTATTCAAGTGGGACCCACGGACGGTCCTCCCCCCCGCCGCCGCGCCCCCCCGCCCCCCGCTCCTGGACTACGTGGTGGCGCCTCCCGCTGTCGCCCCCACCTTCCACCCTGCCAGGGCGGCGCCGCGCGAGCTCGGCGGCCTCGAGGAGCTGTTCCAGGCCTACGGCATCCGCTACTACACGGCCGCCAAGATCGCCGAACTCGGCTTCACTGTTAGCACCCTGGTCGACATGAAGGACGAGGAACTTGACGACATGATGAACAGCCTCTCCCAGATTTTCCGGTGGGACCTCCTCGTCGGCGAGCGCTACGGCATCAAAGCCGCCGTCAGAGCCGAGCGTCGTCGCGTCGACGACGACGACATCAAGCGCCGCAATCACAACAACCTCCTCTCCACCGACACCACCACCAACGCCCTCGATGCCCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGTGGGGGAGGGAGCACGTGGGAGGTGGTGGCGGCGGAGGAGAGGAGGAAGCAGCAGAGGAGGCGGAGGACGAGGATGAAGGAGAATGAGGAGGTTGAAGAGGAGGATGGAGAAGAGAACGATGAAGGGAACAACAACGGTTGCGAGAGGCAGAGGGAACACCCGTTCATCGTGACGGAGCCAGGGGAGGTTGCACGTGGGAAGAAGAACGGTTTGGACTATCTCTTTCATCTCTACGAGCAGTGCCGTGAGTTCTTGATGCAGGTTCAGGCCATTGCCAAGGACCGTGGTGAAAAATGCCCAACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAGGCAGGGGCAAGCTACATAAACAAACCGAAGATGCGACACTACGTGCACTGCTACGCCTTACATTGTCTGGACGAGGAGGTATCGAACGAGCTTCGAAGGGCGTTCAAGGAGAGAGGGGAGAACGTAGGGGCGTGGAGGCAGGCATGTTACAAGCCCCTTGTGGCCATAGCAGCGCGTCAGGGTTGGGACATCGATGCCATATTCAATGCACACCCTCGTCTTTCCATTTGGTATGTTCCAACCAAGCTTCGTCAGCTTTGTCACGCTGAGAGAAACAGTGCTGCAGCTTCAAGCTCCGTCTCTGCTCACCTTCCCTTCTAGCTAATATCCCTATGCATGCAACTCCTCG 1385 0.5791 MDPDAFTASLFKWDPRTVLPPAAAPPRPPLLDYVVAPPAVAPTFHPARAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRVDDDDIKRRNHNNLLSTDTTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVVAAEERRKQQRRRRTRMKENEEVEEEDGEENDEGNNNGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSAHLPF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00222 391 MobiDBLite consensus disorder prediction 214 230 - -
Pste2g00222 391 Gene3D Protein LEAFY 217 386 IPR038276 -
Pste2g00222 391 Pfam Floricaula / Leafy protein SAM domain 53 129 IPR035079 -
Pste2g00222 391 Coils Coil 180 206 - -
Pste2g00222 391 PANTHER PROTEIN LEAFY 1 386 IPR002910 GO:0003677|GO:0006355
Pste2g00222 391 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 214 380 IPR035209 GO:0003677
Pste2g00222 391 MobiDBLite consensus disorder prediction 154 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00222 1 378 Orphan Transcription Factor Family AT5G61850 65.750 4.27e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Pste2g00222 C_LFY_FLO 1.1e-108 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00222 2 1228375 1230712 Pste2g00222 2 1228375 1230712 ECH